myRT

myRT report for GCA_011389745.1_ASM1138974v1

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Seq: JAABTQ010000053.1 Desulfobacteraceae bacterium isolate S24.Bin046 Scaffold_53, whole genome shotgun sequence (13231 bp)
Overview 1 RT 1: 8081-10088 bp Neighborhood of RT #1 [8081, 10088] DUF5343 GIIM RVT-GII YiaG Feature: gene Location: 8081-8713 bp Feature: domain Description: DUF5343 Location: 8096-8507 bp Feature: domain Description: DUF5343 Location: 8096-8507 bp Feature: gene Location: 8823-9107 bp Feature: domain Description: GIIM Note: maturase Location: 8829-8958 bp Feature: domain Description: GIIM Note: maturase Location: 8829-8958 bp Feature: gene Location: 9115-9525 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9121-9511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 21 -951 1 bp Feature: gene Location: 9553-9840 bp Feature: domain Description: YiaG Location: 9652-9823 bp Feature: domain Description: YiaG Location: 9652-9823 bp Feature: gene Location: 9960-10088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5343 (pfam17278), GIIM (pfam08388), RVT-GII, YiaG (COG2944)

Seq: JAABTQ010000061.1 Desulfobacteraceae bacterium isolate S24.Bin046 Scaffold_61, whole genome shotgun sequence (8606 bp)
Overview 1 RT 1: 1013-5633 bp Neighborhood of RT #1 [1013, 5692] RVT-Retrons MTAN TPR TPR tol_pal_ybgF tol_pal_ybgF Feature: gene Location: 1013-1168 bp Feature: gene Location: 1208-1618 bp Feature: gene Location: 1761-2963 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2136-2694 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 136-2 694 bp Feature: gene Location: 3105-3914 bp Feature: domain Description: MTAN Location: 3201-3849 bp Feature: domain Description: MTAN Location: 32 01-3849 bp Feature: gene Location: 3953-5692 bp Feature: domain Description: TPR Location: 4040-4247 bp Feature: domain Description: TPR Location: 4040-42 47 bp Feature: domain Description: TPR Location: 4307-4622 bp Feature: domain Description: TPR Location: 4307-462 2 bp Feature: domain Description: tol_pal_ybgF Location: 4781-5015 bp Feature: domain Description: tol_pal_ybgF Location: 4781-5015 bp Feature: domain Description: tol_pal_ybgF Location: 5474-5633 bp Feature: domain Description: tol_pal_ybgF Location: 5474-5633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, MTAN (cd09008), TPR (smart00028), tol_pal_ybgF (TIGR02795)