myRT

myRT report for GCA_011389815.1_ASM1138981v1

Download annotations/find similar RTs

Seq: JAABTP010000186.1 Desulfobulbaceae bacterium isolate S24.Bin023 NODE_192_length_5256_cov_12.001545, whole genome shotgun sequence (5256 bp)
Overview 1 RT 1: 121-3093 bp Neighborhood of RT #1 [121, 3110] RVT-DGRs HRDC YfmG YfmG Feature: gene Location: 121-285 bp Feature: gene Location: 417-1421 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 624-1215 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 624-1 21 5 bp Feature: gene Location: 1405-1908 bp Feature: domain Description: HRDC Location: 1657-1852 bp Feature: domain Description: HRDC Location: 1 657-1 852 bp Feature: gene Location: 2034-3110 bp Feature: domain Description: YfmG Location: 2199-2535 bp Feature: domain Description: YfmG Location: 21 99-2535 bp Feature: domain Description: YfmG Location: 2628-3093 bp Feature: domain Description: YfmG Location: 2628-3093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, HRDC (smart00341), YfmG (COG1262)

Seq: JAABTP010000024.1 Desulfobulbaceae bacterium isolate S24.Bin023 NODE_25_length_39893_cov_12.246459, whole genome shotgun sequence (39893 bp)
Overview 1 RT 1: 27363-30161 bp Neighborhood of RT #1 [27363, 30283] Fib_succ_major RVT-DGRs DUF507 Avd_like Fib_succ_major Feature: gene Location: 27363-27626 bp Feature: domain Description: Fib_succ_major Location: 27441-27621 bp Feature: domain Description: Fib_succ_major Location: 2 7441-2 762 1 bp Feature: gene Location: 27741-28247 bp Feature: gene Location: 28275-29513 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28479-29181 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 8479-2 9181 bp Feature: domain Description: DUF507 Location: 29238-29469 bp Feature: domain Description: DUF507 Location: 2 92 38-2 9469 bp Feature: gene Location: 29462-29821 bp Feature: domain Description: Avd_like Location: 29489-29801 bp Feature: domain Description: Avd_like Location: 2 9489-2 9801 bp Feature: gene Location: 29903-30283 bp Feature: domain Description: Fib_succ_major Location: 29981-30161 bp Feature: domain Description: Fib_succ_major Location: 2 9981-30161 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Fib_succ_major (TIGR02145), RVT-DGRs, DUF507 (pfam04368), Avd_like (cd16376)

Seq: JAABTP010000037.1 Desulfobulbaceae bacterium isolate S24.Bin023 NODE_38_length_29540_cov_12.194244, whole genome shotgun sequence (29540 bp)
Overview 1 RT 1: 21681-25969 bp Neighborhood of RT #1 [21681, 25969] RelE Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Feature: gene Location: 21681-21941 bp Feature: domain Description: RelE Location: 21684-21939 bp Feature: domain Description: RelE Location: 21684-2193 9 bp Feature: gene Location: 21981-22262 bp Feature: domain Description: Cas2_I_II_III Location: 22002-22212 bp Feature: domain Description: Cas2_I_II_III Location: 22002-22212 bp Feature: gene Location: 22380-25016 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 23343-23937 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 23 3 43 -23 93 7 bp Feature: domain Description: Cas1_I-II-III Location: 24018-24957 bp Feature: domain Description: Cas1_I-II-III Location: 24018-24957 bp Feature: gene Location: 25252-25425 bp Feature: gene Location: 25787-25969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelE (pfam06296), Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656)