myRT

myRT report for GCA_011390065.1_ASM1139006v1

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Seq: JAABTD010000352.1 Desulfobacteraceae bacterium isolate S20.Bin143 Scaffold_31584, whole genome shotgun sequence (3980 bp)
Overview 1 RT 1: 2-3969 bp Neighborhood of RT #1 [2, 3977] RVT-DGRs Avd_like COG5635 COG5635 YfmG Feature: gene Location: 2-775 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5-521 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5-521 bp Feature: gene Location: 741-1118 bp Feature: domain Description: Avd_like Location: 759-1071 bp Feature: domain Description: Avd_like Location: 759-1 071 bp Feature: gene Location: 1398-3977 bp Feature: domain Description: COG5635 Location: 1905-2010 bp Feature: domain Description: COG5635 Location: 1 905-201 0 bp Feature: domain Description: COG5635 Location: 2463-3270 bp Feature: domain Description: COG5635 Location: 2463-3270 bp Feature: domain Description: YfmG Location: 3687-3969 bp Feature: domain Description: YfmG Location: 3687-3969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5635 (Predicted NTPase, NACHT family domain ), YfmG (COG1262), RVT-DGRs, Avd_like (cd16376)

Seq: JAABTD010000004.1 Desulfobacteraceae bacterium isolate S20.Bin143 Scaffold_52_2, whole genome shotgun sequence (25611 bp)
Overview 1 RT 1: 12353-23057 bp Neighborhood of RT #1 [12353, 23062] TauB PRK13557 PAS_3 GAF_2 sensory_box GAF_2 sensory_box PRK13557 RVT-GII BrnA_antitoxin RVT-GII group_II_RT_mat WrbA H2MP_F420-Reduc Feature: gene Location: 12353-13045 bp Feature: domain Description: TauB Location: 12362-13034 bp Feature: domain Description: TauB Location: 12 362 -13034 bp Feature: gene Location: 13166-17374 bp Feature: domain Description: PRK13557 Location: 13241-13628 bp Feature: domain Description: PRK13557 Location: 132 41-1362 8 bp Feature: domain Description: PAS_3 Location: 13631-13889 bp Feature: domain Description: PAS_3 Location: 13631-13889 bp Feature: domain Description: GAF_2 Location: 13976-14387 bp Feature: domain Description: GAF_2 Location: 13976-14387 bp Feature: domain Description: sensory_box Location: 14435-14792 bp Feature: domain Description: sensory_box Location: 14435-14792 bp Feature: domain Description: GAF_2 Location: 15044-15299 bp Feature: domain Description: GAF_2 Location: 15044-152 99 bp Feature: domain Description: sensory_box Location: 15467-15863 bp Feature: domain Description: sensory_box Location: 15467-15863 bp Feature: domain Description: PRK13557 Location: 15938-17372 bp Feature: domain Description: PRK13557 Location: 15938-17372 bp Feature: gene Location: 17516-17740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17531-17735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17531-17735 bp Feature: gene Location: 17741-18049 bp Feature: domain Description: BrnA_antitoxin Location: 17792-17966 bp Feature: domain Description: BrnA_antitoxin Location: 17792 -17966 bp Feature: gene Location: 18102-18482 bp Feature: gene Location: 19405-19560 bp Feature: gene Location: 20149-20409 bp Feature: gene Location: 20550-21059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20598-20718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0598-2 0718 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 20718-21015 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 0718-2 1015 bp Feature: gene Location: 21311-21889 bp Feature: domain Description: WrbA Location: 21314-21689 bp Feature: domain Description: WrbA Location: 2 1314-2 1689 bp Feature: gene Location: 22658-23062 bp Feature: domain Description: H2MP_F420-Reduc Location: 22691-23057 bp Feature: domain Description: H2 MP_F42 0-Reduc Location: 2 2 691-2 3057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TauB (COG4525), PRK13557 (histidine kinase; Provisional), PAS_3 (pfam08447), GAF_2 (pfam13185), sensory_box (TIGR00229), RVT-GII, BrnA_antitoxin (pfam14384), group_II_RT_mat (TIGR04416), WrbA (COG0655), H2MP_F420-Reduc (cd06064)