myRT

myRT report for GCA_011390205.1_ASM1139020v1

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Seq: JAABSX010000104.1 Microscillaceae bacterium isolate S19.Bin083 NODE_104_length_5721_cov_4.05528, whole genome shotgun sequence (5721 bp)
Overview 1 RT 1: 1075-4949 bp Neighborhood of RT #1 [1075, 5194] YfmG Hrd RVT-DGRs Peptidase_C14 Feature: gene Location: 1075-2169 bp Feature: domain Description: YfmG Location: 1468-2161 bp Feature: domain Description: YfmG Location: 1 468-21 61 bp Feature: gene Location: 2264-2710 bp Feature: domain Description: Hrd Location: 2504-2687 bp Feature: domain Description: Hrd Location: 2504-2687 bp Feature: gene Location: 2694-3698 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2904-3489 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2904-3489 bp Feature: gene Location: 3710-3934 bp Feature: gene Location: 3998-5194 bp Feature: domain Description: Peptidase_C14 Location: 4517-4949 bp Feature: domain Description: Peptidase_C1 4 Location: 451 7-4949 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), Hrd (LOAD_Hrd), RVT-DGRs, Peptidase_C14 (pfam00656)

Seq: JAABSX010000028.1 Microscillaceae bacterium isolate S19.Bin083 NODE_28_length_48891_cov_9.51766, whole genome shotgun sequence (48891 bp)
Overview 1 RT 1: 43221-46627 bp Neighborhood of RT #1 [43221, 48888] ParE_toxin TSP3 TSP_3 TSP3 OmpA RVT-Retrons Feature: gene Location: 43221-43577 bp Feature: domain Description: ParE_toxin Location: 43302-43572 bp Feature: domain Description: ParE_toxin Location: 43302 -43572 bp Feature: gene Location: 43677-44816 bp Feature: domain Description: TSP3 Location: 43779-43833 bp Feature: domain Description: TSP3 Location: 43779-43833 bp Feature: domain Description: TSP_3 Location: 44169-44232 bp Feature: domain Description: TSP_3 Location: 44169-442 32 bp Feature: domain Description: TSP3 Location: 44340-44418 bp Feature: domain Description: TSP3 Location: 44340-44418 bp Feature: domain Description: OmpA Location: 44421-44808 bp Feature: domain Description: OmpA Location: 4442 1-44808 bp Feature: gene Location: 45796-48888 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46003-46627 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46003-4662 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE_toxin (pfam05016), TSP3 (sd00002), TSP_3 (pfam02412), OmpA (pfam00691), RVT-Retrons