myRT

myRT report for GCA_011390955.1_ASM1139095v1

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Seq: JAABRM010000029.1 Oscillatoriales cyanobacterium isolate S07.Bin090 Scaffold_114, whole genome shotgun sequence (88704 bp)
Overview 1 RT 1: 1-3992 bp Neighborhood of RT #1 [1, 4006] RVT_N RVT-GII GIIM McrA Phytase-like PDDEXK_2 DUF4351 Feature: gene Location: 1-1635 bp Feature: RT Description: RVT_N Location: 4-145 bp Feature: RT Description: RVT_N Location: 4-1 45 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 87-862 bp Feature: domain Description: GIIM Note: maturase Location: 1006-1237 bp Feature: domain Description: GIIM Note: maturase Location: 1 006-1 237 bp Feature: domain Description: McrA Location: 1318-1615 bp Feature: domain Description: McrA Location: 1 31 8-1 61 5 bp Feature: gene Location: 1693-2985 bp Feature: domain Description: Phytase-like Location: 1990-2935 bp Feature: domain Description: Phytase-like Location: 1 990-2935 bp Feature: gene Location: 3095-4006 bp Feature: domain Description: PDDEXK_2 Location: 3113-3797 bp Feature: domain Description: PDDEXK_2 Location: 31 1 3-3797 bp Feature: domain Description: DUF4351 Location: 3818-3992 bp Feature: domain Description: DUF4351 Location: 381 8-3992 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Phytase-like (pfam13449), PDDEXK_2 (pfam12784), DUF4351 (pfam14261)

Seq: JAABRM010000081.1 Oscillatoriales cyanobacterium isolate S07.Bin090 Scaffold_1309, whole genome shotgun sequence (27268 bp)
Overview 1 RT 1: 5555-12467 bp Neighborhood of RT #1 [5555, 12487] XseB xseA RVT_N RVT-GII GIIM McrA recA AmiC PRK09752 Glucosaminidase Feature: gene Location: 5555-5794 bp Feature: domain Description: XseB Location: 5579-5783 bp Feature: domain Description: XseB Location: 5579-5783 bp Feature: gene Location: 5824-7074 bp Feature: domain Description: xseA Location: 5950-6883 bp Feature: domain Description: xseA Location: 5950-6883 bp Feature: gene Location: 7150-8904 bp Feature: RT Description: RVT_N Location: 7186-7432 bp Feature: RT Description: RVT_N Location: 7186-7432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7474-8167 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7474-8167 bp Feature: domain Description: GIIM Note: maturase Location: 8275-8506 bp Feature: domain Description: GIIM Note: maturase Location: 82 75-8506 bp Feature: domain Description: McrA Location: 8590-8884 bp Feature: domain Description: McrA Location: 8590-8884 bp Feature: gene Location: 9793-10875 bp Feature: domain Description: recA Location: 9814-10819 bp Feature: domain Description: recA Location: 9814-10819 bp Feature: gene Location: 11072-12487 bp Feature: domain Description: AmiC Location: 11081-11621 bp Feature: domain Description: AmiC Location: 11081-1162 1 bp Feature: domain Description: PRK09752 Location: 11639-11747 bp Feature: domain Description: PRK09752 Location: 11639-11747 bp Feature: domain Description: Glucosaminidase Location: 12098-12467 bp Feature: domain Description: Glucosaminidase Location: 12 098-12 467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AmiC (COG0860), PRK09752 (AIDA-I family autotransporter YfaL), Glucosaminidase (pfam01832), XseB (COG1722), xseA (TIGR00237), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), recA (PRK09519)

Seq: JAABRM010000036.1 Oscillatoriales cyanobacterium isolate S07.Bin090 Scaffold_163, whole genome shotgun sequence (74061 bp)
Overview 1 RT 1: 63795-70141 bp Neighborhood of RT #1 [63795, 70155] TlyC RVT_N RVT-GII GIIM HNHc PyrE Feature: gene Location: 63795-65423 bp Feature: domain Description: TlyC Location: 63885-65190 bp Feature: domain Description: TlyC Location: 63 885-65190 bp Feature: gene Location: 65525-66217 bp Feature: gene Location: 67120-68850 bp Feature: RT Description: RVT_N Location: 67156-67402 bp Feature: RT Description: RVT_N Location: 67156-67402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67444-68134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67444-6813 4 bp Feature: domain Description: GIIM Note: maturase Location: 68233-68440 bp Feature: domain Description: GIIM Note: maturase Location: 6823 3 -68440 bp Feature: domain Description: HNHc Note: nucleases Location: 68677-68818 bp Feature: domain Description: HNHc Note: nucleases Location: 68677-68818 bp Feature: gene Location: 69051-69419 bp Feature: gene Location: 69556-70155 bp Feature: domain Description: PyrE Location: 69613-70141 bp Feature: domain Description: PyrE Location: 69613 -70141 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TlyC (COG1253), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PyrE (COG0461)

Seq: JAABRM010000096.1 Oscillatoriales cyanobacterium isolate S07.Bin090 Scaffold_3753, whole genome shotgun sequence (15418 bp)
Overview 1 RT 1: 9027-15169 bp Neighborhood of RT #1 [9027, 15183] STKc_PknB_like YfmG Avd_like RVT-DGRs STKc_PknB_like YfmG Feature: gene Location: 9027-10886 bp Feature: domain Description: STKc_PknB_like Location: 9123-9906 bp Feature: domain Description: STKc_PknB_like Location: 9123-9906 bp Feature: domain Description: YfmG Location: 10134-10872 bp Feature: domain Description: YfmG Location: 10134 -10872 bp Feature: gene Location: 11134-11469 bp Feature: domain Description: Avd_like Location: 11152-11458 bp Feature: domain Description: Avd_like Location: 11152-114 58 bp Feature: gene Location: 11730-12785 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 11940-12582 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1194 0-12582 bp Feature: gene Location: 12862-13023 bp Feature: gene Location: 13279-15183 bp Feature: domain Description: STKc_PknB_like Location: 13375-14209 bp Feature: domain Description: STKc_PknB_like Location: 13375-14 209 bp Feature: domain Description: YfmG Location: 14389-15169 bp Feature: domain Description: YfmG Location: 14 389-15169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, STKc_PknB_like (cd14014), YfmG (COG1262)

Seq: JAABRM010000100.1 Oscillatoriales cyanobacterium isolate S07.Bin090 Scaffold_4764, whole genome shotgun sequence (13443 bp)
Overview 1 RT 1: 606-7584 bp Neighborhood of RT #1 [606, 7584] RVT_N RVT-GII GIIM HNHc RVT_N RVT-GII GIIM McrA ACCS Acetyltransf_3 Feature: gene Location: 606-2285 bp Feature: RT Description: RVT_N Location: 666-909 bp Feature: RT Description: RVT_N Location: 666-909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951-1593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 1-15 93 bp Feature: domain Description: GIIM Note: maturase Location: 1650-1878 bp Feature: domain Description: GIIM Note: maturase Location: 165 0-1878 bp Feature: domain Description: HNHc Note: nucleases Location: 2100-2262 bp Feature: domain Description: HNHc Note: nucleases Location: 2100-2262 bp Feature: gene Location: 2430-4064 bp Feature: RT Description: RVT_N Location: 2433-2562 bp Feature: RT Description: RVT_N Location: 2433-25 62 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2604-3294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2604-3294 bp Feature: domain Description: GIIM Note: maturase Location: 3435-3666 bp Feature: domain Description: GIIM Note: maturase Location: 3435 -3666 bp Feature: domain Description: McrA Location: 3744-4044 bp Feature: domain Description: McrA Location: 3744-4044 bp Feature: gene Location: 4569-7334 bp Feature: domain Description: ACCS Location: 4635-6534 bp Feature: domain Description: ACCS Location: 4635 -65 34 bp Feature: domain Description: Acetyltransf_3 Location: 6849-7275 bp Feature: domain Description: Acetyltransf_3 Location: 6849-7275 bp Feature: gene Location: 7438-7584 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), ACCS (COG1042), Acetyltransf_3 (pfam13302), HNHc (smart00507)