myRT

myRT report for GCA_011391695.1_ASM1139169v1

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Seq: JAABQB010000110.1 Desulfobacteraceae bacterium isolate S02.Bin041 NODE_111_length_2941_cov_4.73399, whole genome shotgun sequence (2941 bp)
Overview 1 RT 1: 2-2923 bp Neighborhood of RT #1 [2, 2940] RVT-GII GIIM DDE_Tnp_1_4 RAYT Feature: gene Location: 2-328 bp Feature: gene Location: 540-1898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-1512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 852-1 51 2 bp Feature: domain Description: GIIM Note: maturase Location: 1581-1785 bp Feature: domain Description: GIIM Note: maturase Location: 1 581 -1 785 bp Feature: gene Location: 1955-2578 bp Feature: domain Description: DDE_Tnp_1_4 Location: 2132-2510 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 21 32-251 0 bp Feature: gene Location: 2725-2940 bp Feature: domain Description: RAYT Location: 2728-2923 bp Feature: domain Description: RAYT Location: 2728-2923 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RAYT (COG1943), RVT-GII, GIIM (pfam08388)

Seq: JAABQB010000009.1 Desulfobacteraceae bacterium isolate S02.Bin041 NODE_9_length_68534_cov_5.16727, whole genome shotgun sequence (68534 bp)
Overview 1 RT 1: 66382-68443 bp Neighborhood of RT #1 [66382, 68532] COG5340 RVT-GII GIIM Feature: gene Location: 66382-66672 bp Feature: gene Location: 66713-67306 bp Feature: domain Description: COG5340 Location: 66758-67058 bp Feature: domain Description: COG5340 Location: 66758-67058 bp Feature: gene Location: 67831-68532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67843-68152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67843-68152 bp Feature: domain Description: GIIM Note: maturase Location: 68224-68443 bp Feature: domain Description: GIIM Note: maturase Location: 682 2 4-68443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5340 (Transcriptional regulator, predicted component of viral defense system ), RVT-GII, GIIM (pfam08388)