myRT

myRT report for GCA_011391705.1_ASM1139170v1

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Seq: JAABQA010000024.1 Desulfobacter sp. isolate S02.Bin034 NODE_24_length_56839_cov_14.286892, whole genome shotgun sequence (56839 bp)
Overview 1 RT 1: 45512-49136 bp Neighborhood of RT #1 [45512, 49136] SDR_a8 HTH_ARSR RVT-GII GIIM Feature: gene Location: 45512-46426 bp Feature: domain Description: SDR_a8 Location: 45521-46403 bp Feature: domain Description: SDR_a8 Location: 45521 -46403 bp Feature: gene Location: 46655-47005 bp Feature: domain Description: HTH_ARSR Location: 46763-46979 bp Feature: domain Description: HTH_ARSR Location: 46763-46979 bp Feature: gene Location: 47191-48534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47452-48070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47452-48070 bp Feature: domain Description: GIIM Note: maturase Location: 48112-48331 bp Feature: domain Description: GIIM Note: maturase Location: 481 1 2-48331 bp Feature: gene Location: 48506-48772 bp Feature: gene Location: 48975-49136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SDR_a8 (cd05242), HTH_ARSR (smart00418), RVT-GII, GIIM (pfam08388)

Seq: JAABQA010000043.1 Desulfobacter sp. isolate S02.Bin034 NODE_43_length_32064_cov_14.050208, whole genome shotgun sequence (32064 bp)
Overview 1 RT 1: 29205-31998 bp Neighborhood of RT #1 [29205, 32063] GAPDH-I DUF4214 RVT-GII GIIM Feature: gene Location: 29205-30455 bp Feature: domain Description: GAPDH-I Location: 29232-30417 bp Feature: domain Description: GAPDH-I Location: 2 92 32 -30417 bp Feature: gene Location: 30618-31319 bp Feature: domain Description: DUF4214 Location: 30666-30852 bp Feature: domain Description: DUF42 14 Location: 30666-30852 bp Feature: gene Location: 31443-32063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31446-31716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31446-31716 bp Feature: domain Description: GIIM Note: maturase Location: 31791-31998 bp Feature: domain Description: GIIM Note: maturase Location: 31791-31998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GAPDH-I (TIGR01534), DUF4214 (pfam13946), RVT-GII, GIIM (pfam08388)