myRT

myRT report for GCA_011392415.1_ASM1139241v1

Download annotations/find similar RTs

Seq: SCLU01000121.1 Lactobacillus helveticus strain UC1266, whole genome shotgun sequence (5172 bp)
Overview 1 RT 1: 142-4681 bp Neighborhood of RT #1 [142, 4681] SunT GIIM RVT-GII Feature: gene Location: 142-1392 bp Feature: domain Description: SunT Location: 214-1387 bp Feature: domain Description: SunT Location: 21 4-1 387 bp Feature: gene Location: 1530-1868 bp Feature: domain Description: GIIM Note: maturase Location: 1536-1653 bp Feature: domain Description: GIIM Note: maturase Location: 1 536-1 653 bp Feature: gene Location: 1983-2828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2184-2799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 84-2799 bp Feature: gene Location: 4114-4356 bp Feature: gene Location: 4412-4681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SunT (COG2274), GIIM (pfam08388), RVT-GII

Seq: SCLU01000126.1 Lactobacillus helveticus strain UC1266, whole genome shotgun sequence (13720 bp)
Overview 1 RT 1: 5193-10180 bp Neighborhood of RT #1 [5193, 10180] PRK09564 LysR RVT-GII SlpA SlpA Feature: gene Location: 5193-6557 bp Feature: domain Description: PRK09564 Location: 5208-6531 bp Feature: domain Description: PRK09564 Location: 52 08-6531 bp Feature: gene Location: 6638-7384 bp Feature: domain Description: LysR Location: 6641-7025 bp Feature: domain Description: LysR Location: 6641-702 5 bp Feature: gene Location: 7436-7882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7439-7727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7439-772 7 bp Feature: gene Location: 7900-8289 bp Feature: domain Description: SlpA Location: 7903-8068 bp Feature: domain Description: SlpA Location: 7903-8068 bp Feature: domain Description: SlpA Location: 8095-8257 bp Feature: domain Description: SlpA Location: 8095-82 57 bp Feature: gene Location: 8495-10180 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09564 (coenzyme A disulfide reductase; Reviewed), LysR (COG0583), RVT-GII, SlpA (COG1047)