myRT

myRT report for GCA_011392735.1_ASM1139273v1

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Seq: WINY01000175.1 Enterobacter hormaechei strain AUH-ENM41 NODE_175_length_7915_cov_12.856596, whole genome shotgun sequence (7915 bp)
Overview 1 RT 1: 6516-7880 bp Neighborhood of RT #1 [6516, 7888] Ogr_Delta RVT-Retrons Feature: gene Location: 6516-6788 bp Feature: domain Description: Ogr_Delta Location: 6540-6675 bp Feature: domain Description: Ogr_Delta Location: 6540-6675 bp Feature: gene Location: 6984-7205 bp Feature: gene Location: 7511-7888 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7661-7880 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7661 -7880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ogr_Delta (pfam04606), RVT-Retrons

Seq: WINY01000262.1 Enterobacter hormaechei strain AUH-ENM41 NODE_262_length_2273_cov_54.292350, whole genome shotgun sequence (2273 bp)
Overview 1 RT 1: 93-2272 bp Neighborhood of RT #1 [93, 2272] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: gene Location: 1910-2272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WINY01000332.1 Enterobacter hormaechei strain AUH-ENM41 NODE_332_length_686_cov_16.952381, whole genome shotgun sequence (686 bp)
Overview 1 RT 1: 2-338 bp Neighborhood of RT #1 [2, 685] RVT-Retrons Feature: gene Location: 2-685 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5-338 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5-3 3 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: WINY01000048.1 Enterobacter hormaechei strain AUH-ENM41 NODE_48_length_32742_cov_19.287433, whole genome shotgun sequence (32742 bp)
Overview 1 RT 1: 7366-17288 bp Neighborhood of RT #1 [7366, 17392] TIGR02687 YeeA RVT-UG5 nitrilase YeeA YeeA Feature: gene Location: 7366-9969 bp Feature: domain Description: TIGR02687 Location: 7384-9937 bp Feature: domain Description: TIGR02687 Location: 7384 -9937 bp Feature: gene Location: 10178-11953 bp Feature: domain Description: YeeA Location: 10229-11885 bp Feature: domain Description: YeeA Location: 10229-11885 bp Feature: gene Location: 11953-14955 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 12415-12901 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 124 15-12901 bp Feature: domain Description: nitrilase Location: 14167-14857 bp Feature: domain Description: nitrilase Location: 14 167-14 857 bp Feature: gene Location: 14986-15435 bp Feature: gene Location: 15458-17392 bp Feature: domain Description: YeeA Location: 16097-16808 bp Feature: domain Description: YeeA Location: 16097-16808 bp Feature: domain Description: YeeA Location: 16964-17288 bp Feature: domain Description: YeeA Location: 16964 -17288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02687 (TIGR02687 family protein), YeeA (COG1002), RVT-UG5, nitrilase (cl11424)