myRT

myRT report for GCA_011392995.1_ASM1139299v1

Download annotations/find similar RTs

Seq: JAAOHZ010000069.1 Salmonella enterica subsp. enterica serovar Typhimurium strain CNR1776 CNR1776_S11_L001_R1_001_(paired)_contig_69, whole genome shotgun sequence (48641 bp)
Overview 1 RT 1: 44643-48529 bp Neighborhood of RT #1 [44643, 48529] PRK10473 RVT-Retrons Feature: gene Location: 44643-45830 bp Feature: domain Description: PRK10473 Location: 44646-45822 bp Feature: domain Description: PRK1 0473 Location: 44646-45822 bp Feature: gene Location: 46175-46384 bp Feature: gene Location: 46632-47567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46743-47328 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46743-47328 bp Feature: gene Location: 47567-48529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons

Seq: JAAOHZ010000072.1 Salmonella enterica subsp. enterica serovar Typhimurium strain CNR1776 CNR1776_S11_L001_R1_001_(paired)_contig_72, whole genome shotgun sequence (3492 bp)
Overview 1 RT 1: 95-3081 bp Neighborhood of RT #1 [95, 3081] PHA02517 RVT-GII GIIM Feature: gene Location: 95-424 bp Feature: domain Description: PHA02517 Location: 98-416 bp Feature: domain Description: PHA02 517 Location: 98-416 bp Feature: gene Location: 634-2157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 907-1639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 907-1639 bp Feature: domain Description: GIIM Note: maturase Location: 1714-1912 bp Feature: domain Description: GIIM Note: maturase Location: 1714-1912 bp Feature: gene Location: 2451-2822 bp Feature: gene Location: 2899-3081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)