myRT

myRT report for GCA_011516625.2_ASM1151662v2

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Seq: JAAOLF020000001.1 Bradyrhizobium sp. 2S1 Bradyrhizobium_sp_2S1_Contig1, whole genome shotgun sequence (226973 bp) Associated domains: RVT-GII, GIIM (pfam08388), PRK06526 (transposase; Provisional), COG4584 (Transposase ), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG3547 (Transposase ), InsE (COG2963), TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007)
zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), integrase_gron (TIGR02249), INT_Cre_C (cd00799), DUF3670 (pfam12419), HepA (COG0553), COG4279 (Uncharacterized conserved protein, contains Zn finger domain )

Seq: JAAOLF020000002.1 Bradyrhizobium sp. 2S1 Bradyrhizobium_sp_2S1_Contig2, whole genome shotgun sequence (171818 bp) Associated domains: HTH_29 (pfam13551), PRK00215 (transcriptional repressor LexA), RVT-GII, COG3547 (Transposase ), PRK08181 (transposase; Validated), GIIM (pfam08388), PRK06526 (transposase; Provisional)

Seq: JAAOLF020000003.1 Bradyrhizobium sp. 2S1 Bradyrhizobium_sp_2S1_Contig3, whole genome shotgun sequence (3606771 bp) Associated domains: InsE (COG2963), TnpB_IS66 (pfam05717), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), PRK12467 (peptide synthase; Provisional)
alpha_am_amid (TIGR03443), PRK12316 (peptide synthase; Provisional), AFD_class_I (cl17068), EntF (COG3319), COG4584 (Transposase ), RVT-UG11, TIGR02246 (conserved hypothetical protein), DUF1211 (pfam06736), PHA02517 (putative transposase OrfB; Reviewed), COG3436 (Transposase )

Seq: JAAOLF020000004.1 Bradyrhizobium sp. 2S1 Bradyrhizobium_sp_2S1_Contig4, whole genome shotgun sequence (6504631 bp) Associated domains: PerM (COG0628), rve (pfam00665), RVT-GII, GIIM (pfam08388), IstB_IS21 (pfam01695), COG4584 (Transposase ), Glyco_trans_1_2 (pfam13524), GT4_WbuB-like (cd03794), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005)
DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), COG3415 (Transposase ), DDE_3 (pfam13358), Tra8 (COG2826), TnpB_IS66 (pfam05717), InsE (COG2963), HTH_32 (pfam13565), HTH_Tnp_1 (pfam01527), DHDPS (pfam00701)
COG3436 (Transposase ), COG3547 (Transposase ), Transposase_mut (pfam00872), PHA02517 (putative transposase OrfB; Reviewed), DDE_Tnp_1_4 (pfam13701), COG3464 (Transposase )

Seq: JAAOLF020000005.1 Bradyrhizobium sp. 2S1 Bradyrhizobium_sp_2S1_Contig5, whole genome shotgun sequence (150960 bp) Associated domains: COG4584 (Transposase ), IstB_IS21 (pfam01695), RVT-GII, GIIM (pfam08388), HTH_32 (pfam13565), DDE_3 (pfam13358)

Seq: JAAOLF020000006.1 Bradyrhizobium sp. 2S1 Bradyrhizobium_sp_2S1_Contig6, whole genome shotgun sequence (1076238 bp) Associated domains: LpqC (COG3509), FN3 (smart00060), RVT-GII, HTH_23 (pfam13384), COG3415 (Transposase ), InsE (COG2963), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005)
GIIM (pfam08388), TnpB_IS66 (pfam05717), HTH_Tnp_1 (pfam01527), PHA02517 (putative transposase OrfB; Reviewed), Transposase_mut (pfam00872)