myRT

myRT report for GCA_011523765.1_ASM1152376v1

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Seq: WTGA01000093.1 Gammaproteobacteria bacterium isolate CO36386bin_3 NODE_1093_length_23145_cov_12.623950, whole genome shotgun sequence (23145 bp)
Overview 1 RT 1: 5018-9758 bp Neighborhood of RT #1 [5018, 9758] TolQ DUF4145 RVT-Retrons Feature: gene Location: 5018-5641 bp Feature: domain Description: TolQ Location: 5021-5618 bp Feature: domain Description: TolQ Location: 5021 -561 8 bp Feature: gene Location: 6022-6846 bp Feature: domain Description: DUF4145 Location: 6442-6670 bp Feature: domain Description: DUF41 45 Location: 6442-6670 bp Feature: gene Location: 7042-7917 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7192-7717 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71 92-771 7 bp Feature: gene Location: 8992-9450 bp Feature: gene Location: 9462-9758 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TolQ (COG0811), DUF4145 (pfam13643), RVT-Retrons

Seq: WTGA01000138.1 Gammaproteobacteria bacterium isolate CO36386bin_3 NODE_6826_length_4904_cov_16.192411, whole genome shotgun sequence (4904 bp)
Overview 1 RT 1: 1020-3260 bp Neighborhood of RT #1 [1020, 3260] PinE RelB RVT-GII COG4710 Feature: gene Location: 1020-1634 bp Feature: domain Description: PinE Location: 1083-1626 bp Feature: domain Description: PinE Location: 1083-162 6 bp Feature: gene Location: 1839-2099 bp Feature: domain Description: RelB Location: 1842-2094 bp Feature: domain Description: RelB Location: 1842 -2 094 bp Feature: gene Location: 2204-2491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2279-2360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 79-2 360 bp Feature: gene Location: 2738-2965 bp Feature: domain Description: COG4710 Location: 2741-2954 bp Feature: domain Description: COG4710 Location: 2 741-2 954 bp Feature: gene Location: 3039-3260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RelB (pfam04221), RVT-GII, COG4710 (Predicted DNA-binding protein with an HTH domain )