myRT

myRT report for GCA_011602525.1_ASM1160252v1

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Seq: JAANCP010000014.1 Escherichia coli strain H2O2_t1 contig00014, whole genome shotgun sequence (136329 bp)
Overview 1 RT 1: 22242-28485 bp Neighborhood of RT #1 [22242, 28622] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22242-22508 bp Feature: domain Description: Phage_integrase Location: 22308-22404 bp Feature: domain Description: Phage_integrase Location: 22308-22404 bp Feature: gene Location: 22591-23061 bp Feature: gene Location: 23408-26617 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23936-24425 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23936-24425 bp Feature: domain Description: nitrilase Location: 25931-26528 bp Feature: domain Description: nitrilase Location: 25931 -26528 bp Feature: gene Location: 26912-27715 bp Feature: domain Description: AbiEi_3_N Location: 26945-27206 bp Feature: domain Description: AbiEi_3_N Location: 26945-27206 bp Feature: domain Description: AbiEi_3 Location: 27218-27674 bp Feature: domain Description: AbiEi_3 Location: 2721 8-27674 bp Feature: gene Location: 27702-28622 bp Feature: domain Description: AbiEii Location: 27744-28485 bp Feature: domain Description: AbiEii Location: 27744-28485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JAANCP010000025.1 Escherichia coli strain H2O2_t1 contig00025, whole genome shotgun sequence (67276 bp)
Overview 1 RT 1: 65353-67235 bp Neighborhood of RT #1 [65353, 67273] Asparaginase_2 RVT-GII Feature: gene Location: 65353-66384 bp Feature: domain Description: Asparaginase_2 Location: 65443-66376 bp Feature: domain Description: Asparaginase_2 Location: 65443-66376 bp Feature: gene Location: 66711-66860 bp Feature: gene Location: 66908-67273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67133-67235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67133-672 35 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Asparaginase_2 (pfam01112), RVT-GII

Seq: JAANCP010000053.1 Escherichia coli strain H2O2_t1 contig00053, whole genome shotgun sequence (16710 bp)
Overview 1 RT 1: 15147-16576 bp Neighborhood of RT #1 [15147, 16707] RVT-GII GIIM RVT-GII Feature: gene Location: 15147-15317 bp Feature: gene Location: 15455-15601 bp Feature: gene Location: 15700-16221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15706-15988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15706-15988 bp Feature: domain Description: GIIM Note: maturase Location: 16036-16216 bp Feature: domain Description: GIIM Note: maturase Location: 1603 6-16216 bp Feature: gene Location: 16249-16707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16498-16576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16498-16576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)