myRT

myRT report for GCA_011603175.1_ASM1160317v1

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Seq: JAANCU010000015.1 Escherichia coli strain D72 contig00015, whole genome shotgun sequence (136329 bp)
Overview 1 RT 1: 22242-28485 bp Neighborhood of RT #1 [22242, 28622] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22242-22508 bp Feature: domain Description: Phage_integrase Location: 22308-22404 bp Feature: domain Description: Phage_integrase Location: 22308-22404 bp Feature: gene Location: 22591-23061 bp Feature: gene Location: 23408-26617 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23936-24425 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23936-24425 bp Feature: domain Description: nitrilase Location: 25931-26528 bp Feature: domain Description: nitrilase Location: 25931 -26528 bp Feature: gene Location: 26912-27715 bp Feature: domain Description: AbiEi_3_N Location: 26945-27206 bp Feature: domain Description: AbiEi_3_N Location: 26945-27206 bp Feature: domain Description: AbiEi_3 Location: 27218-27674 bp Feature: domain Description: AbiEi_3 Location: 2721 8-27674 bp Feature: gene Location: 27702-28622 bp Feature: domain Description: AbiEii Location: 27744-28485 bp Feature: domain Description: AbiEii Location: 27744-28485 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)

Seq: JAANCU010000026.1 Escherichia coli strain D72 contig00026, whole genome shotgun sequence (67276 bp)
Overview 1 RT 1: 1-1916 bp Neighborhood of RT #1 [1, 1924] RVT-GII Asparaginase_2 Feature: gene Location: 1-369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 229-331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 9-331 bp Feature: gene Location: 417-566 bp Feature: gene Location: 893-1924 bp Feature: domain Description: Asparaginase_2 Location: 983-1916 bp Feature: domain Description: Asparaginase_2 Location: 983-1916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Asparaginase_2 (pfam01112)

Seq: JAANCU010000052.1 Escherichia coli strain D72 contig00052, whole genome shotgun sequence (16710 bp)
Overview 1 RT 1: 15147-16576 bp Neighborhood of RT #1 [15147, 16707] RVT-GII GIIM RVT-GII Feature: gene Location: 15147-15317 bp Feature: gene Location: 15455-15601 bp Feature: gene Location: 15700-16221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15706-15988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15706-15988 bp Feature: domain Description: GIIM Note: maturase Location: 16036-16216 bp Feature: domain Description: GIIM Note: maturase Location: 1603 6-16216 bp Feature: gene Location: 16249-16707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16498-16576 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16498-16576 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)