myRT

myRT report for GCA_011604935.1_ASM1160493v1

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Seq: JAAQGL010000130.1 Escherichia coli strain RT29-1 NODE_130_length_1477_cov_413.323571, whole genome shotgun sequence (1477 bp)
Overview 1 RT 1: 93-1230 bp Neighborhood of RT #1 [93, 1475] RVT-GII GIIM Feature: gene Location: 93-1475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225-957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 225-957 bp Feature: domain Description: GIIM Note: maturase Location: 1032-1230 bp Feature: domain Description: GIIM Note: maturase Location: 1 032-1 230 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAQGL010000006.1 Escherichia coli strain RT29-1 NODE_6_length_164419_cov_97.887217, whole genome shotgun sequence (164419 bp)
Overview 1 RT 1: 96008-99735 bp Neighborhood of RT #1 [96008, 99941] DinI RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 96008-96241 bp Feature: domain Description: DinI Location: 96050-96236 bp Feature: domain Description: DinI Location: 96050-962 36 bp Feature: gene Location: 96328-96477 bp Feature: gene Location: 96671-97654 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96818-97412 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96818-97412 bp Feature: gene Location: 97647-99260 bp Feature: domain Description: COG3950 Location: 97791-99225 bp Feature: domain Description: COG3950 Location: 97791-992 2 5 bp Feature: gene Location: 99273-99941 bp Feature: domain Description: TIGR02646 Location: 99339-99735 bp Feature: domain Description: TIGR02 646 Location: 99339-99735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)