myRT

myRT report for GCA_011604975.1_ASM1160497v1

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Seq: JAAQGK010000132.1 Escherichia coli strain RT18-1 NODE_132_length_1477_cov_417.011429, whole genome shotgun sequence (1477 bp)
Overview 1 RT 1: 3-1140 bp Neighborhood of RT #1 [3, 1385] RVT-GII GIIM Feature: gene Location: 3-1385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 135-867 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 35-867 bp Feature: domain Description: GIIM Note: maturase Location: 942-1140 bp Feature: domain Description: GIIM Note: maturase Location: 942-1 1 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAQGK010000005.1 Escherichia coli strain RT18-1 NODE_5_length_164483_cov_102.832269, whole genome shotgun sequence (164483 bp)
Overview 1 RT 1: 64543-68471 bp Neighborhood of RT #1 [64543, 68476] TIGR02646 COG3950 RVT-Retrons DinI Feature: gene Location: 64543-65211 bp Feature: domain Description: TIGR02646 Location: 64609-65005 bp Feature: domain Description: TIGR02 646 Location: 64609-65005 bp Feature: gene Location: 65224-66837 bp Feature: domain Description: COG3950 Location: 65368-66802 bp Feature: domain Description: COG3950 Location: 65368-66802 bp Feature: gene Location: 66830-67813 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66977-67571 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66977-67571 bp Feature: gene Location: 68007-68156 bp Feature: gene Location: 68243-68476 bp Feature: domain Description: DinI Location: 68285-68471 bp Feature: domain Description: DinI Location: 682 85-68471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, DinI (pfam06183)