myRT

myRT report for GCA_011605495.1_ASM1160549v1

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Seq: JAANQE010000006.1 Cronobacter sakazakii strain HA18074 NODE_15, whole genome shotgun sequence (16653 bp)
Overview 1 RT 1: 3477-7160 bp Neighborhood of RT #1 [3477, 7225] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 3477-4118 bp Feature: gene Location: 4143-4577 bp Feature: domain Description: PHA02517 Location: 4146-4569 bp Feature: domain Description: PHA0251 7 Location: 41 46-4569 bp Feature: gene Location: 4700-6223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4973-5705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4973-5705 bp Feature: domain Description: GIIM Note: maturase Location: 5780-5978 bp Feature: domain Description: GIIM Note: maturase Location: 5780-5978 bp Feature: gene Location: 6177-6602 bp Feature: gene Location: 6815-7225 bp Feature: domain Description: PHA02517 Location: 6821-7160 bp Feature: domain Description: PHA0251 7 Location: 6821 -71 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: JAANQE010000026.1 Cronobacter sakazakii strain HA18074 NODE_3, whole genome shotgun sequence (638940 bp)
Overview 1 RT 1: 296699-302039 bp Neighborhood of RT #1 [296699, 302039] TIGR02646 COG3950 RVT-Retrons Feature: gene Location: 296699-297346 bp Feature: domain Description: TIGR02646 Location: 296768-297155 bp Feature: domain Description: TIGR02 646 Location: 2 96768-2 97155 bp Feature: gene Location: 297349-299004 bp Feature: domain Description: COG3950 Location: 297550-298972 bp Feature: domain Description: COG3950 Location: 2 97550-2 98972 bp Feature: gene Location: 299001-299933 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 299103-299700 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 99103-2 99700 bp Feature: gene Location: 300627-300785 bp Feature: gene Location: 301041-302039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons