myRT

myRT report for GCA_011605705.1_ASM1160570v1

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Seq: JAAOZR010000064.1 Paenibacillus aceris strain KACC 19194 C1039, whole genome shotgun sequence (481 bp)
Overview 1 RT 1: 1-469 bp Neighborhood of RT #1 [1, 480] RVT-GII Feature: gene Location: 1-480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88-469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88-469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: JAAOZR010000073.1 Paenibacillus aceris strain KACC 19194 C1167, whole genome shotgun sequence (950 bp)
Overview 1 RT 1: 3-633 bp Neighborhood of RT #1 [3, 854] RVT-GII GIIM GIIM Feature: gene Location: 3-854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18-261 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18-2 61 bp Feature: domain Description: GIIM Note: maturase Location: 345-459 bp Feature: domain Description: GIIM Note: maturase Location: 345-459 bp Feature: domain Description: GIIM Note: maturase Location: 537-633 bp Feature: domain Description: GIIM Note: maturase Location: 537-633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAOZR010000081.1 Paenibacillus aceris strain KACC 19194 C1271, whole genome shotgun sequence (1880 bp)
Overview 1 RT 1: 80-1877 bp Neighborhood of RT #1 [80, 1877] RVT-GII GIIM Feature: gene Location: 80-1471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-1040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 422-1040 bp Feature: domain Description: GIIM Note: maturase Location: 1091-1304 bp Feature: domain Description: GIIM Note: maturase Location: 1091-13 04 bp Feature: gene Location: 1719-1877 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAOZR010000098.1 Paenibacillus aceris strain KACC 19194 C1749, whole genome shotgun sequence (143509 bp)
Overview 1 RT 1: 83108-88163 bp Neighborhood of RT #1 [83108, 88192] IscR RadC RVT-GII PRK00024 PRK13927 Feature: gene Location: 83108-83605 bp Feature: domain Description: IscR Location: 83156-83561 bp Feature: domain Description: IscR Location: 83156-83561 bp Feature: gene Location: 83716-84219 bp Feature: domain Description: RadC Location: 83743-84205 bp Feature: domain Description: RadC Location: 8374 3-84 205 bp Feature: gene Location: 84883-86778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85177-85891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85177-85891 bp Feature: gene Location: 86865-87122 bp Feature: domain Description: PRK00024 Location: 86922-87117 bp Feature: domain Description: PRK00024 Location: 86922-87117 bp Feature: gene Location: 87158-88192 bp Feature: domain Description: PRK13927 Location: 87170-88163 bp Feature: domain Description: PRK13927 Location: 87170-88163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IscR (TIGR02010), RadC (pfam04002), RVT-GII, PRK00024 (DNA repair protein RadC), PRK13927 (rod shape-determining protein MreB; Provisional)

Seq: JAAOZR010000013.1 Paenibacillus aceris strain KACC 19194 scaffold13, whole genome shotgun sequence (374140 bp)
Overview 1 RT 1: 353850-358187 bp Neighborhood of RT #1 [353850, 358187] RVT-GII PBP2_AlgQ_like_2 Feature: gene Location: 353850-354137 bp Feature: gene Location: 354261-354533 bp Feature: gene Location: 354902-355930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 355283-355403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35 5 283-35 5 403 bp Feature: gene Location: 356074-357717 bp Feature: domain Description: PBP2_AlgQ_like_2 Location: 356230-357697 bp Feature: domain Description: PBP2_AlgQ_like_2 Location: 35 6230-35 7697 bp Feature: gene Location: 357918-358187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PBP2_AlgQ_like_2 (cd13581)

Seq: JAAOZR010000018.1 Paenibacillus aceris strain KACC 19194 scaffold18, whole genome shotgun sequence (219677 bp)
Overview 1 RT 1: 111-2918 bp 2 RT 2: 218360-219596 bp Neighborhood of RT #1 [111, 2938] RVT-GII HNHc COG3291 HAD_Pase Neighborhood of RT #2 [218360, 219640] RVT-GII Feature: gene Location: 111-1259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114-417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114-417 bp Feature: domain Description: HNHc Note: nucleases Location: 1014-1179 bp Feature: domain Description: HNHc Note: nucleases Location: 1014-1179 bp Feature: gene Location: 1495-2058 bp Feature: domain Description: COG3291 Location: 1510-1891 bp Feature: domain Description: COG3291 Location: 1510-1891 bp Feature: gene Location: 2132-2938 bp Feature: domain Description: HAD_Pase Location: 2147-2918 bp Feature: domain Description: HAD_Pase Location: 2147-2918 bp Feature: gene Location: 218360-218560 bp Feature: gene Location: 218701-218835 bp Feature: gene Location: 218918-219640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219218-219596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219218-219596 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), COG3291 (PKD repeat ), HAD_Pase (cd16418)

Seq: JAAOZR010000024.1 Paenibacillus aceris strain KACC 19194 scaffold24, whole genome shotgun sequence (905667 bp)
Overview 1 RT 1: 20-10495 bp Neighborhood of RT #1 [20, 10533] RVT-GII RVT-GII HNHc CARDB FN3 FN3 Feature: gene Location: 20-781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338-716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338-7 16 bp Feature: gene Location: 874-1158 bp Feature: gene Location: 1477-1806 bp Feature: gene Location: 1939-3804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2257-2959 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2257 -2959 bp Feature: domain Description: HNHc Note: nucleases Location: 3556-3721 bp Feature: domain Description: HNHc Note: nucleases Location: 3556-37 21 bp Feature: gene Location: 3993-4295 bp Feature: gene Location: 4507-10533 bp Feature: domain Description: CARDB Location: 5554-5851 bp Feature: domain Description: CARDB Location: 5554-5851 bp Feature: domain Description: FN3 Location: 9802-10078 bp Feature: domain Description: FN3 Location: 9802-1007 8 bp Feature: domain Description: FN3 Location: 10435-10495 bp Feature: domain Description: FN3 Location: 10435-10495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), CARDB (pfam07705), FN3 (smart00060)

Seq: JAAOZR010000028.1 Paenibacillus aceris strain KACC 19194 scaffold28, whole genome shotgun sequence (12320 bp)
Overview 1 RT 1: 3784-7430 bp Neighborhood of RT #1 [3784, 7430] RVT-GII GIIM Feature: gene Location: 3784-4032 bp Feature: gene Location: 4148-4414 bp Feature: gene Location: 4771-6150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5077-5713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5077-5713 bp Feature: domain Description: GIIM Note: maturase Location: 5791-6034 bp Feature: domain Description: GIIM Note: maturase Location: 5791-6034 bp Feature: gene Location: 6308-6643 bp Feature: gene Location: 7101-7430 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAAOZR010000042.1 Paenibacillus aceris strain KACC 19194 scaffold42, whole genome shotgun sequence (364896 bp)
Overview 1 RT 1: 362253-364835 bp Neighborhood of RT #1 [362253, 364894] HTH_TipAL-Mta TipAS KOG2123 RVT-GII GIIM Feature: gene Location: 362253-363080 bp Feature: domain Description: HTH_TipAL-Mta Location: 362292-362595 bp Feature: domain Description: HTH_TipAL-Mta Location: 36229 2-36259 5 bp Feature: domain Description: TipAS Location: 362775-363000 bp Feature: domain Description: TipAS Location: 362775-363000 bp Feature: gene Location: 363306-363992 bp Feature: domain Description: KOG2123 Location: 363372-363681 bp Feature: domain Description: KOG2123 Location: 363372-363681 bp Feature: gene Location: 364193-364894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364265-364535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364265-364535 bp Feature: domain Description: GIIM Note: maturase Location: 364625-364835 bp Feature: domain Description: GIIM Note: maturase Location: 364625-364835 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_TipAL-Mta (cd01106), TipAS (pfam07739), KOG2123 (KOG2123, Uncharacterized conserved protein ), RVT-GII, GIIM (pfam08388)