myRT

myRT report for GCA_011682175.1_ASM1168217v1

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Seq: WHJG01000113.1 Massilia sp. CCM 8695 NODE_113_length_1628_cov_32.448368, whole genome shotgun sequence (1628 bp)
Overview 1 RT 1: 1-1423 bp Neighborhood of RT #1 [1, 1596] RVT-GII Feature: gene Location: 1-1596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733-1423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 733-1 423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WHJG01000121.1 Massilia sp. CCM 8695 NODE_121_length_1362_cov_7.758704, whole genome shotgun sequence (1362 bp)
Overview 1 RT 1: 79-1361 bp Neighborhood of RT #1 [79, 1361] RVT-GII Feature: gene Location: 79-567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 280-529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 80-52 9 bp Feature: gene Location: 599-880 bp Feature: gene Location: 1113-1361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WHJG01000001.1 Massilia sp. CCM 8695 NODE_1_length_496146_cov_8.016199, whole genome shotgun sequence (496146 bp)
Overview 1 RT 1: 286063-291103 bp Neighborhood of RT #1 [286063, 291129] RVT-Retrons PurR MFS_FucP_MFSD4_like Feature: gene Location: 286063-286614 bp Feature: gene Location: 286652-287176 bp Feature: gene Location: 287266-288600 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 287725-288364 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 287725-2883 64 bp Feature: gene Location: 288838-289848 bp Feature: domain Description: PurR Location: 288844-289834 bp Feature: domain Description: PurR Location: 288844-28983 4 bp Feature: gene Location: 289900-291129 bp Feature: domain Description: MFS_FucP_MFSD4_like Location: 289933-291103 bp Feature: domain Description: MFS_FucP_MFSD4_like Location: 28993 3 -291103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PurR (COG1609), MFS_FucP_MFSD4_like (cd17333)

Seq: WHJG01000047.1 Massilia sp. CCM 8695 NODE_47_length_48743_cov_7.844228, whole genome shotgun sequence (48743 bp)
Overview 1 RT 1: 181-4317 bp Neighborhood of RT #1 [181, 4775] RVT-GII GIIM Dimer_Tnp_Tn5 Beta_propel LVIVD Beta_propel Feature: gene Location: 181-939 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187-550 bp Feature: domain Description: GIIM Note: maturase Location: 631-853 bp Feature: domain Description: GIIM Note: maturase Location: 631-853 bp Feature: gene Location: 1031-1402 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 1112-1367 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 1112-1367 bp Feature: gene Location: 1743-4775 bp Feature: domain Description: Beta_propel Location: 2013-3384 bp Feature: domain Description: Beta_propel Location: 2013-3384 bp Feature: domain Description: LVIVD Location: 3594-3822 bp Feature: domain Description: LVIVD Location: 3594 -3822 bp Feature: domain Description: Beta_propel Location: 4017-4317 bp Feature: domain Description: Beta_propel Location: 4 017-4 317 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Dimer_Tnp_Tn5 (pfam02281), Beta_propel (pfam09826), LVIVD (sd00042), RVT-GII, GIIM (pfam08388)

Seq: WHJG01000072.1 Massilia sp. CCM 8695 NODE_72_length_16926_cov_7.521400, whole genome shotgun sequence (16926 bp)
Overview 1 RT 1: 9347-15641 bp Neighborhood of RT #1 [9347, 16372] WGR_DNA_ligase HEAT_2 HEAT_2 RVT-Retrons Feature: gene Location: 9347-12454 bp Feature: domain Description: WGR_DNA_ligase Location: 9377-9590 bp Feature: domain Description: WGR_DNA_ligase Location: 9377-95 90 bp Feature: domain Description: HEAT_2 Location: 9722-9932 bp Feature: domain Description: HEAT_2 Location: 9722-9932 bp Feature: domain Description: HEAT_2 Location: 11477-11585 bp Feature: domain Description: HEAT_2 Location: 11477-115 85 bp Feature: gene Location: 12451-14097 bp Feature: gene Location: 14462-16372 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15026-15641 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15 026-15 641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646)