myRT

myRT report for GCA_011682185.1_ASM1168218v1

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Seq: WHJF01000113.1 Massilia sp. CCM 8694 NODE_113_length_21057_cov_6.289059, whole genome shotgun sequence (21057 bp)
Overview 1 RT 1: 18462-20944 bp Neighborhood of RT #1 [18462, 20944] ihfB RVT-GII GIIM Feature: gene Location: 18462-18767 bp Feature: domain Description: ihfB Location: 18465-18738 bp Feature: domain Description: ihfB Location: 1 8465-1 8738 bp Feature: gene Location: 18802-18930 bp Feature: gene Location: 19235-20584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19550-20165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9550-201 65 bp Feature: domain Description: GIIM Note: maturase Location: 20222-20438 bp Feature: domain Description: GIIM Note: maturase Location: 20222-20438 bp Feature: gene Location: 20753-20944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ihfB (PRK00199), RVT-GII, GIIM (pfam08388)

Seq: WHJF01000132.1 Massilia sp. CCM 8694 NODE_132_length_16140_cov_6.126272, whole genome shotgun sequence (16140 bp)
Overview 1 RT 1: 203-5070 bp Neighborhood of RT #1 [203, 7958] RVT-Retrons WGR_DNA_ligase Feature: gene Location: 203-2116 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 767-1382 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 767-1382 bp Feature: gene Location: 2482-4137 bp Feature: gene Location: 4134-7958 bp Feature: domain Description: WGR_DNA_ligase Location: 4851-5070 bp Feature: domain Description: WGR_DNA_ligase Location: 4851-5070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, WGR_DNA_ligase (cd07998)

Seq: WHJF01000347.1 Massilia sp. CCM 8694 NODE_347_length_679_cov_74.277174, whole genome shotgun sequence (679 bp)
Overview 1 RT 1: 1-670 bp Neighborhood of RT #1 [1, 678] RVT-GII GIIM Feature: gene Location: 1-678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-478 bp Feature: domain Description: GIIM Note: maturase Location: 541-670 bp Feature: domain Description: GIIM Note: maturase Location: 541-670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WHJF01000355.1 Massilia sp. CCM 8694 NODE_355_length_614_cov_0.644764, whole genome shotgun sequence (614 bp)
Overview 1 RT 1: 1-598 bp Neighborhood of RT #1 [1, 612] RVT-GII Feature: gene Location: 1-612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154-598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 154 -598 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WHJF01000385.1 Massilia sp. CCM 8694 NODE_385_length_499_cov_47.134409, whole genome shotgun sequence (499 bp)
Overview 1 RT 1: 130-496 bp Neighborhood of RT #1 [130, 498] RVT-GII Feature: gene Location: 130-498 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238-496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238-496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WHJF01000651.1 Massilia sp. CCM 8694 NODE_651_length_251_cov_4.604839, whole genome shotgun sequence (251 bp)
Overview 1 RT 1: 82-235 bp Neighborhood of RT #1 [82, 249] RVT-GII Feature: gene Location: 82-249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88-235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88-235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WHJF01000091.1 Massilia sp. CCM 8694 NODE_91_length_29502_cov_6.139030, whole genome shotgun sequence (29502 bp)
Overview 1 RT 1: 14042-20287 bp Neighborhood of RT #1 [14042, 20301] SMI1_KNR4 RVT-Retrons P-type_ATPase_HM_ZosA_PfeT-like PurR Feature: gene Location: 14042-14572 bp Feature: gene Location: 14681-15085 bp Feature: domain Description: SMI1_KNR4 Location: 14714-15062 bp Feature: domain Description: SMI1_KNR4 Location: 147 14-15062 bp Feature: gene Location: 15124-16488 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15586-16222 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15586-16222 bp Feature: gene Location: 16584-18704 bp Feature: domain Description: P-type_ATPase_HM_ZosA_PfeT-like Location: 16725-18621 bp Feature: domain Description: P-type_ATPase_HM_ZosA_PfeT-like Location: 167 25-18621 bp Feature: gene Location: 19291-20301 bp Feature: domain Description: PurR Location: 19297-20287 bp Feature: domain Description: PurR Location: 19297 -20287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SMI1_KNR4 (smart00860), RVT-Retrons, P-type_ATPase_HM_ZosA_PfeT-like (cd07551), PurR (COG1609)