myRT

myRT report for GCA_011682735.1_ASM1168273v1

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Seq: SPUA01000034.1 Klebsiella pneumoniae strain NICU_1_P7 NODE_34_length_49829_cov_12.006713, whole genome shotgun sequence (49829 bp)
Overview 1 RT 1: 4132-11251 bp Neighborhood of RT #1 [4132, 11280] IncA RVT-UG5 PRK04247 RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Feature: gene Location: 4132-4836 bp Feature: domain Description: IncA Location: 4453-4795 bp Feature: domain Description: IncA Location: 4453-4795 bp Feature: gene Location: 4879-5196 bp Feature: gene Location: 5254-8271 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5752-6247 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 5752-6247 bp Feature: gene Location: 8451-9551 bp Feature: domain Description: PRK04247 Location: 8514-8745 bp Feature: domain Description: PRK04247 Location: 851 4-8745 bp Feature: gene Location: 9562-11280 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 9889-10423 bp Feature: domain Description: RMtype1 _S_Ppo21 ORF8840P_TRD1 -CR1 _like Location: 9889-1 0423 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 10873-11251 bp Feature: domain Description: RMtype1 _S_Ppo21 ORF8840P_TRD1 -CR1 _like Location: 1 0873-1 1 251 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IncA, RVT-UG5, PRK04247 (endonuclease NucS), RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like (cd17293)

Seq: SPUA01000045.1 Klebsiella pneumoniae strain NICU_1_P7 NODE_45_length_30709_cov_11.020665, whole genome shotgun sequence (30709 bp)
Overview 1 RT 1: 26522-30707 bp Neighborhood of RT #1 [26522, 30707] umuC RVT-Retrons Feature: gene Location: 26522-26956 bp Feature: gene Location: 26929-27606 bp Feature: domain Description: umuC Location: 26932-27604 bp Feature: domain Description: umuC Location: 2 6932 -2 7604 bp Feature: gene Location: 28039-29223 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 28186-28765 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 8186-2 8765 bp Feature: gene Location: 29220-29921 bp Feature: gene Location: 30573-30707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), RVT-Retrons

Seq: SPUA01000052.1 Klebsiella pneumoniae strain NICU_1_P7 NODE_52_length_26768_cov_16.377618, whole genome shotgun sequence (26768 bp)
Overview 1 RT 1: 18497-21681 bp Neighborhood of RT #1 [18497, 21681] PRK10276 RVT-GII Feature: gene Location: 18497-18922 bp Feature: domain Description: PRK10276 Location: 18500-18908 bp Feature: domain Description: PRK10276 Location: 18500-18908 bp Feature: gene Location: 19040-19273 bp Feature: gene Location: 19324-20835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19729-20443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19729-20443 bp Feature: gene Location: 21069-21299 bp Feature: gene Location: 21358-21681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII