myRT

myRT report for GCA_011714795.1_ASM1171479v1

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Seq: RXXP01000030.1 Streptococcus pseudopneumoniae strain CCUG 71653 NODE_30_length_24164_cov_358.432640, whole genome shotgun sequence (24164 bp)
Overview 1 RT 1: 1-3261 bp Neighborhood of RT #1 [1, 3302] RVT-GII RVT-GII PRK00106 SR_TndX_transposase Feature: gene Location: 1-279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-280 bp Feature: gene Location: 296-598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 500-587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 500-587 bp Feature: gene Location: 1302-2915 bp Feature: domain Description: PRK00106 Location: 1311-2913 bp Feature: domain Description: PRK001 06 Location: 1 31 1 -291 3 bp Feature: gene Location: 2967-3302 bp Feature: domain Description: SR_TndX_transposase Location: 3006-3261 bp Feature: domain Description: SR_TndX_transposase Location: 3006-3261 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK00106 (ribonuclease Y)

Seq: RXXP01000034.1 Streptococcus pseudopneumoniae strain CCUG 71653 NODE_34_length_20899_cov_341.005187, whole genome shotgun sequence (20899 bp)
Overview 1 RT 1: 15596-19423 bp Neighborhood of RT #1 [15596, 19423] INT_ICEBs1_C_like GIIM RVT-GII GIIM eno Feature: gene Location: 15596-15844 bp Feature: domain Description: INT_ICEBs1_C_like Location: 15614-15779 bp Feature: domain Description: INT_ICEBs1_C_like Location: 15614-15779 bp Feature: gene Location: 15928-16236 bp Feature: domain Description: GIIM Note: maturase Location: 15961-16045 bp Feature: domain Description: GIIM Note: maturase Location: 15961-16045 bp Feature: gene Location: 16185-17204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16389-17004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16389-17004 bp Feature: domain Description: GIIM Note: maturase Location: 17058-17196 bp Feature: domain Description: GIIM Note: maturase Location: 17058-17196 bp Feature: gene Location: 17826-19130 bp Feature: domain Description: eno Location: 17829-19122 bp Feature: domain Description: eno Location: 1782 9-1912 2 bp Feature: gene Location: 19292-19423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_ICEBs1_C_like (cd01189), GIIM (pfam08388), RVT-GII, eno (TIGR01060)