myRT

myRT report for GCA_011714915.1_ASM1171491v1

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Seq: RXXV01000016.1 Streptococcus pseudopneumoniae strain CCUG 50868 NODE_16_length_43331_cov_382.608915, whole genome shotgun sequence (43331 bp)
Overview 1 RT 1: 24454-31045 bp Neighborhood of RT #1 [24454, 31362] COG0610 PRK00106 RVT-GII RVT-GII HTH_29 Feature: gene Location: 24454-27432 bp Feature: domain Description: COG0610 Location: 24475-27160 bp Feature: domain Description: COG061 0 Location: 24475-271 60 bp Feature: gene Location: 27556-29169 bp Feature: domain Description: PRK00106 Location: 27565-29167 bp Feature: domain Description: PRK001 06 Location: 27565-291 67 bp Feature: gene Location: 29872-30174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30076-30163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30076-301 63 bp Feature: gene Location: 30191-30553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30194-30551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 301 94-30551 bp Feature: gene Location: 30643-30828 bp Feature: gene Location: 30829-31362 bp Feature: domain Description: HTH_29 Location: 30874-31045 bp Feature: domain Description: HTH_29 Location: 30874-31 045 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), PRK00106 (ribonuclease Y), RVT-GII, HTH_29 (pfam13551)