myRT

myRT report for GCA_011714955.1_ASM1171495v1

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Seq: RXXW01000028.1 Streptococcus pseudopneumoniae strain CCUG 47366 NODE_28_length_24408_cov_370.660474, whole genome shotgun sequence (24408 bp)
Overview 1 RT 1: 21227-24406 bp Neighborhood of RT #1 [21227, 24405] SR_TndX_transposase PRK00106 RVT-GII RVT-GII Feature: gene Location: 21227-21442 bp Feature: domain Description: SR_TndX_transposase Location: 21230-21401 bp Feature: domain Description: SR_TndX_transposase Location: 21 230-21 401 bp Feature: gene Location: 21494-23107 bp Feature: domain Description: PRK00106 Location: 21503-23105 bp Feature: domain Description: PRK001 06 Location: 21 503-231 05 bp Feature: gene Location: 23811-24113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24015-24102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2401 5-241 02 bp Feature: gene Location: 24130-24405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24133-24406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 33-24406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SR_TndX_transposase (cd03770), PRK00106 (ribonuclease Y), RVT-GII

Seq: RXXW01000031.1 Streptococcus pseudopneumoniae strain CCUG 47366 NODE_31_length_20917_cov_340.598916, whole genome shotgun sequence (20917 bp)
Overview 1 RT 1: 1770-9102 bp Neighborhood of RT #1 [1770, 9149] eno RVT-GII GIIM INT_ICEBs1_C_like rexB_recomb Feature: gene Location: 1770-3074 bp Feature: domain Description: eno Location: 1773-3066 bp Feature: domain Description: eno Location: 1773-3066 bp Feature: gene Location: 3081-3260 bp Feature: gene Location: 3696-4961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3900-4515 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3900-4515 bp Feature: domain Description: GIIM Note: maturase Location: 4569-4782 bp Feature: domain Description: GIIM Note: maturase Location: 4569-4782 bp Feature: gene Location: 5056-5304 bp Feature: domain Description: INT_ICEBs1_C_like Location: 5074-5239 bp Feature: domain Description: INT_ICEBs1_C_like Location: 5074-52 39 bp Feature: gene Location: 5850-9149 bp Feature: domain Description: rexB_recomb Location: 5880-9102 bp Feature: domain Description: rexB_recomb Location: 5880-9102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT eno (TIGR01060), RVT-GII, GIIM (pfam08388), INT_ICEBs1_C_like (cd01189), rexB_recomb (TIGR02774)