myRT

myRT report for GCA_011742085.1_ASM1174208v1

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Seq: JAAQTK010000028.1 Klebsiella pneumoniae strain BA39950, whole genome shotgun sequence (46998 bp)
Overview 1 RT 1: 13851-18566 bp Neighborhood of RT #1 [13851, 18566] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT_N RVT-GII GIIM HNHc Feature: gene Location: 13851-14201 bp Feature: domain Description: TnpB_IS66 Location: 13878-14169 bp Feature: domain Description: TnpB_IS66 Location: 1 3878-1 41 69 bp Feature: gene Location: 14232-15845 bp Feature: domain Description: LZ_Tnp_IS66 Location: 14412-14622 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 441 2-1 4622 bp Feature: domain Description: zf-IS66 Location: 14646-14778 bp Feature: domain Description: zf-IS66 Location: 1 4646-1 4778 bp Feature: domain Description: DDE_Tnp_IS66 Location: 14823-15690 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 4823-1 5690 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 15714-15822 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 571 4-1 5822 bp Feature: gene Location: 16050-17717 bp Feature: RT Description: RVT_N Location: 16098-16335 bp Feature: RT Description: RVT_N Location: 1 6098-1 6335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16386-17028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6386-1 7028 bp Feature: domain Description: GIIM Note: maturase Location: 17079-17313 bp Feature: domain Description: GIIM Note: maturase Location: 1 7079-1 731 3 bp Feature: domain Description: HNHc Note: nucleases Location: 17523-17682 bp Feature: domain Description: HNHc Note: nucleases Location: 1 7523-1 7682 bp Feature: gene Location: 17997-18179 bp Feature: gene Location: 18291-18566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)