myRT

myRT report for GCA_011742195.1_ASM1174219v1

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Seq: JAAQSS010000023.1 Klebsiella pneumoniae strain BA10334, whole genome shotgun sequence (73313 bp)
Overview 1 RT 1: 34580-41448 bp Neighborhood of RT #1 [34580, 41450] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 34580-35308 bp Feature: domain Description: FimC Location: 34628-35291 bp Feature: domain Description: FimC Location: 34628-35291 bp Feature: gene Location: 35340-37949 bp Feature: domain Description: FimD Location: 35397-37938 bp Feature: domain Description: FimD Location: 35397-37938 bp Feature: gene Location: 37949-40027 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 38357-38801 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 38357-38801 bp Feature: gene Location: 40084-40524 bp Feature: domain Description: Integrase_1 Location: 40090-40306 bp Feature: domain Description: Integrase_1 Location: 40090-40306 bp Feature: gene Location: 40785-41450 bp Feature: domain Description: INT_P4_C Location: 40890-41448 bp Feature: domain Description: INT_P4_C Location: 40890-41 448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: JAAQSS010000062.1 Klebsiella pneumoniae strain BA10334, whole genome shotgun sequence (1914 bp)
Overview 1 RT 1: 3-1464 bp Neighborhood of RT #1 [3, 1856] RVT-GII Feature: gene Location: 3-215 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII