myRT

myRT report for GCA_011742205.1_ASM1174220v1

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Seq: JAAQSB010000027.1 Klebsiella pneumoniae strain BA39576, whole genome shotgun sequence (46999 bp)
Overview 1 RT 1: 28145-33116 bp Neighborhood of RT #1 [28145, 33148] RVT_N RVT-GII GIIM HNHc LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C TnpB_IS66 Feature: gene Location: 28145-28402 bp Feature: gene Location: 28433-28708 bp Feature: gene Location: 29282-30949 bp Feature: RT Description: RVT_N Location: 29330-29567 bp Feature: RT Description: RVT_N Location: 29330-29567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29618-30260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2961 8-30260 bp Feature: domain Description: GIIM Note: maturase Location: 30311-30545 bp Feature: domain Description: GIIM Note: maturase Location: 3031 1 -30545 bp Feature: domain Description: HNHc Note: nucleases Location: 30755-30914 bp Feature: domain Description: HNHc Note: nucleases Location: 30755-3091 4 bp Feature: gene Location: 31154-32767 bp Feature: domain Description: LZ_Tnp_IS66 Location: 31334-31544 bp Feature: domain Description: LZ_Tnp_IS66 Location: 31 334-31 544 bp Feature: domain Description: zf-IS66 Location: 31568-31700 bp Feature: domain Description: zf-IS66 Location: 31 568-31 700 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31745-32612 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31 745-3261 2 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 32636-32744 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 32636-32744 bp Feature: gene Location: 32798-33148 bp Feature: domain Description: TnpB_IS66 Location: 32825-33116 bp Feature: domain Description: TnpB_IS66 Location: 32825-331 1 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), TnpB_IS66 (pfam05717)

Seq: JAAQSB010000041.1 Klebsiella pneumoniae strain BA39576, whole genome shotgun sequence (12804 bp)
Overview 1 RT 1: 9146-12349 bp Neighborhood of RT #1 [9146, 12741] umuC PRK10276 RVT-GII Feature: gene Location: 9146-10417 bp Feature: domain Description: umuC Location: 9149-10409 bp Feature: domain Description: umuC Location: 9149-10409 bp Feature: gene Location: 10417-11229 bp Feature: domain Description: PRK10276 Location: 10849-11212 bp Feature: domain Description: PRK102 76 Location: 10849-112 12 bp Feature: gene Location: 11254-12741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11659-12349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11659-12 349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, umuC (PRK03609)