myRT

myRT report for GCA_011742225.1_ASM1174222v1

Download annotations/find similar RTs

Seq: JAAQSF010000021.1 Klebsiella pneumoniae strain BA36541, whole genome shotgun sequence (68477 bp)
Overview 1 RT 1: 52163-56361 bp Neighborhood of RT #1 [52163, 56363] RVT_N RVT-GII GIIM HNHc DUF1380 Antirestrict Feature: gene Location: 52163-52420 bp Feature: gene Location: 52451-52726 bp Feature: gene Location: 53300-54967 bp Feature: RT Description: RVT_N Location: 53348-53585 bp Feature: RT Description: RVT_N Location: 53348-53585 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53636-54278 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53636-54278 bp Feature: domain Description: GIIM Note: maturase Location: 54329-54563 bp Feature: domain Description: GIIM Note: maturase Location: 54329-54563 bp Feature: domain Description: HNHc Note: nucleases Location: 54773-54932 bp Feature: domain Description: HNHc Note: nucleases Location: 54773-54932 bp Feature: gene Location: 55469-55891 bp Feature: domain Description: DUF1380 Location: 55472-55769 bp Feature: domain Description: DUF1 380 Location: 55472-55769 bp Feature: gene Location: 55938-56363 bp Feature: domain Description: Antirestrict Location: 56073-56361 bp Feature: domain Description: Antirestrict Location: 56073-56361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF1380 (pfam07128), Antirestrict (pfam03230)

Seq: JAAQSF010000024.1 Klebsiella pneumoniae strain BA36541, whole genome shotgun sequence (49573 bp)
Overview 1 RT 1: 23938-30390 bp Neighborhood of RT #1 [23938, 30390] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 23938-24243 bp Feature: gene Location: 25126-27402 bp Feature: domain Description: AAA_15 Location: 25159-26167 bp Feature: domain Description: AAA_15 Location: 2 5159-2 6167 bp Feature: gene Location: 27517-28617 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27700-28228 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 7700-2 82 2 8 bp Feature: gene Location: 29273-30109 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 29762-29933 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 9762 -2 9933 bp Feature: gene Location: 30139-30390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: JAAQSF010000050.1 Klebsiella pneumoniae strain BA36541, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 3-1464 bp Neighborhood of RT #1 [3, 1856] RVT-GII Feature: gene Location: 3-215 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII