myRT

myRT report for GCA_011742295.1_ASM1174229v1

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Seq: JAAQSW010000022.1 Klebsiella pneumoniae strain BA4439, whole genome shotgun sequence (73192 bp)
Overview 1 RT 1: 34580-41448 bp Neighborhood of RT #1 [34580, 41450] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 34580-35308 bp Feature: domain Description: FimC Location: 34628-35291 bp Feature: domain Description: FimC Location: 34628-35291 bp Feature: gene Location: 35340-37949 bp Feature: domain Description: FimD Location: 35397-37938 bp Feature: domain Description: FimD Location: 35397-37938 bp Feature: gene Location: 37949-40027 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 38357-38801 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 38357-38801 bp Feature: gene Location: 40084-40524 bp Feature: domain Description: Integrase_1 Location: 40090-40306 bp Feature: domain Description: Integrase_1 Location: 40090-40306 bp Feature: gene Location: 40785-41450 bp Feature: domain Description: INT_P4_C Location: 40890-41448 bp Feature: domain Description: INT_P4_C Location: 40890-41 448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: JAAQSW010000057.1 Klebsiella pneumoniae strain BA4439, whole genome shotgun sequence (1892 bp)
Overview 1 RT 1: 59-1891 bp Neighborhood of RT #1 [59, 1891] RVT-GII Feature: gene Location: 59-1546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1154 bp Feature: gene Location: 1700-1891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII