myRT

myRT report for GCA_011742515.1_ASM1174251v1

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Seq: JAAQSL010000024.1 Klebsiella pneumoniae strain BA12818, whole genome shotgun sequence (67085 bp)
Overview 1 RT 1: 12115-16027 bp Neighborhood of RT #1 [12115, 16027] Antirestrict DUF1380 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 12115-12540 bp Feature: domain Description: Antirestrict Location: 12250-12538 bp Feature: domain Description: Antirestrict Location: 1 2250-1 2538 bp Feature: gene Location: 12587-13009 bp Feature: domain Description: DUF1380 Location: 12590-12887 bp Feature: domain Description: DUF1 380 Location: 1 2590-1 2887 bp Feature: gene Location: 13511-15178 bp Feature: RT Description: RVT_N Location: 13559-13796 bp Feature: RT Description: RVT_N Location: 1 3559-1 3796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13847-14489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3847-1 4489 bp Feature: domain Description: GIIM Note: maturase Location: 14540-14774 bp Feature: domain Description: GIIM Note: maturase Location: 1 4540-1 4774 bp Feature: domain Description: HNHc Note: nucleases Location: 14984-15143 bp Feature: domain Description: HNHc Note: nucleases Location: 1 4984-1 51 43 bp Feature: gene Location: 15458-15640 bp Feature: gene Location: 15752-16027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), DUF1380 (pfam07128), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: JAAQSL010000025.1 Klebsiella pneumoniae strain BA12818, whole genome shotgun sequence (49573 bp)
Overview 1 RT 1: 23938-30390 bp Neighborhood of RT #1 [23938, 30390] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 23938-24243 bp Feature: gene Location: 25126-27402 bp Feature: domain Description: AAA_15 Location: 25159-26167 bp Feature: domain Description: AAA_15 Location: 2 5159-2 6167 bp Feature: gene Location: 27517-28617 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27700-28228 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 7700-2 82 2 8 bp Feature: gene Location: 29273-30109 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 29762-29933 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 9762 -2 9933 bp Feature: gene Location: 30139-30390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: JAAQSL010000045.1 Klebsiella pneumoniae strain BA12818, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 3-1464 bp Neighborhood of RT #1 [3, 1856] RVT-GII Feature: gene Location: 3-215 bp Feature: gene Location: 369-1856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 774-1464 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII