myRT

myRT report for GCA_011742905.1_ASM1174290v1

Download annotations/find similar RTs

Seq: JAAQRZ010000002.1 Escherichia coli strain 65, whole genome shotgun sequence (825731 bp)
Overview 1 RT 1: 544986-548018 bp 2 RT 2: 571385-575705 bp Neighborhood of RT #1 [544986, 548018] RVT-GII GIIM RVT-GII Neighborhood of RT #2 [571385, 575758] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 544986-545156 bp Feature: gene Location: 545294-545440 bp Feature: gene Location: 545539-546060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 545545-545827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 545545-545827 bp Feature: domain Description: GIIM Note: maturase Location: 545875-546055 bp Feature: domain Description: GIIM Note: maturase Location: 545875-546055 bp Feature: gene Location: 546088-546627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 546418-546496 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54641 8-546496 bp Feature: gene Location: 546658-546855 bp Feature: gene Location: 547113-548018 bp Feature: gene Location: 571385-572209 bp Feature: gene Location: 572336-572596 bp Feature: domain Description: PHA02517 Location: 572342-572561 bp Feature: domain Description: PHA0251 7 Location: 572342-572561 bp Feature: gene Location: 573217-574740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 573490-574222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 573490-574222 bp Feature: domain Description: GIIM Note: maturase Location: 574297-574495 bp Feature: domain Description: GIIM Note: maturase Location: 574297-574495 bp Feature: gene Location: 574917-575303 bp Feature: domain Description: PHA02517 Location: 574920-575301 bp Feature: domain Description: PHA0251 7 Location: 574920-575301 bp Feature: gene Location: 575408-575758 bp Feature: domain Description: InsE Location: 575417-575705 bp Feature: domain Description: InsE Location: 57541 7-575705 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: JAAQRZ010000009.1 Escherichia coli strain 65, whole genome shotgun sequence (166002 bp)
Overview 1 RT 1: 22256-28499 bp Neighborhood of RT #1 [22256, 28636] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 22256-22522 bp Feature: domain Description: Phage_integrase Location: 22322-22418 bp Feature: domain Description: Phage_integrase Location: 2 2 32 2 -2 2 418 bp Feature: gene Location: 22605-23075 bp Feature: gene Location: 23422-26631 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 23950-24439 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 2 3950-2 4439 bp Feature: domain Description: nitrilase Location: 25945-26542 bp Feature: domain Description: nitrilase Location: 2 5945-2 6542 bp Feature: gene Location: 26926-27729 bp Feature: domain Description: AbiEi_3_N Location: 26959-27220 bp Feature: domain Description: AbiEi_3_N Location: 2 6959-2 72 2 0 bp Feature: domain Description: AbiEi_3 Location: 27232-27688 bp Feature: domain Description: AbiEi_3 Location: 2 72 32 -2 7688 bp Feature: gene Location: 27716-28636 bp Feature: domain Description: AbiEii Location: 27758-28499 bp Feature: domain Description: AbiEii Location: 2 7758-2 8499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)