myRT

myRT report for GCA_011752945.1_ASM1175294v1

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Seq: VWWM01000018.1 Paraburkholderia sp. Cy-641 NODE_16_length_134501_cov_39.178249/0, whole genome shotgun sequence (134501 bp)
Overview 1 RT 1: 24758-30389 bp 2 RT 2: 66232-72403 bp Neighborhood of RT #1 [24758, 30616] ALDH_AAS00426 HcaE RVT-GII GIIM HTH_19 Neighborhood of RT #2 [66232, 72438] GHL6 A4_beta-galactosidase_middle_domain DUF4096 RVT-GII GIIM VirB9_CagX_TrbG VirB10 Feature: gene Location: 24758-26206 bp Feature: domain Description: ALDH_AAS00426 Location: 24839-26189 bp Feature: domain Description: ALDH_AAS00426 Location: 24839-261 89 bp Feature: gene Location: 26210-27412 bp Feature: domain Description: HcaE Location: 26303-27371 bp Feature: domain Description: HcaE Location: 26303-27371 bp Feature: gene Location: 28048-29418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28384-28999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28384-28999 bp Feature: domain Description: GIIM Note: maturase Location: 29056-29272 bp Feature: domain Description: GIIM Note: maturase Location: 29056-29272 bp Feature: gene Location: 29831-30040 bp Feature: gene Location: 30170-30616 bp Feature: domain Description: HTH_19 Location: 30206-30389 bp Feature: domain Description: HTH_1 9 Location: 30206-30389 bp Feature: gene Location: 66232-68385 bp Feature: domain Description: GHL6 Location: 66313-66715 bp Feature: domain Description: GHL6 Location: 6631 3-6671 5 bp Feature: domain Description: A4_beta-galactosidase_middle_domain Location: 67378-67738 bp Feature: domain Description: A4_beta-galactosidase_middle_domain Location: 67378-67738 bp Feature: gene Location: 68873-69073 bp Feature: domain Description: DUF4096 Location: 68885-68981 bp Feature: domain Description: DUF4096 Location: 68885-68981 bp Feature: gene Location: 69154-70098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 69163-69826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 691 63-69826 bp Feature: domain Description: GIIM Note: maturase Location: 69895-70030 bp Feature: domain Description: GIIM Note: maturase Location: 69895-70030 bp Feature: gene Location: 70682-71107 bp Feature: domain Description: VirB9_CagX_TrbG Location: 70784-71021 bp Feature: domain Description: VirB9_CagX_TrbG Location: 70784-71 021 bp Feature: gene Location: 71104-72438 bp Feature: domain Description: VirB10 Location: 71857-72403 bp Feature: domain Description: VirB1 0 Location: 71 857-72403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ALDH_AAS00426 (cd07109), HcaE (COG4638), RVT-GII, GIIM (pfam08388), HTH_19 (pfam12844), GHL6 (pfam14871), A4_beta-galactosidase_middle_domain (cd03143), DUF4096 (pfam13340), VirB9_CagX_TrbG (cl11423), VirB10 (COG2948)