myRT

myRT report for GCA_011754195.1_ASM1175419v1

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Seq: JAAKDI010000008.1 Serratia symbiotica isolate PLYR-94S sequence008, whole genome shotgun sequence (63113 bp)
Overview 1 RT 1: 2-4043 bp Neighborhood of RT #1 [2, 4045] RVT-GII GIIM PRK10869 ppnK Feature: gene Location: 2-1132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98-716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98-71 6 bp Feature: domain Description: GIIM Note: maturase Location: 770-980 bp Feature: domain Description: GIIM Note: maturase Location: 770-980 bp Feature: gene Location: 1419-3080 bp Feature: domain Description: PRK10869 Location: 1422-3078 bp Feature: domain Description: PRK1 0869 Location: 1 422-3078 bp Feature: gene Location: 3167-4045 bp Feature: domain Description: ppnK Location: 3170-4043 bp Feature: domain Description: ppnK Location: 31 70-4043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK10869 (recombination and repair protein; Provisional), ppnK (PRK04885)

Seq: JAAKDI010000009.1 Serratia symbiotica isolate PLYR-94S sequence009, whole genome shotgun sequence (62703 bp)
Overview 1 RT 1: 1388-4413 bp 2 RT 2: 57320-61416 bp Neighborhood of RT #1 [1388, 4413] Terminase_3 rve RVT-GII GIIM Neighborhood of RT #2 [57320, 61424] rpmE2 RVT-GII RVT-GII AAA_15 Feature: gene Location: 1388-1774 bp Feature: domain Description: Terminase_3 Location: 1454-1760 bp Feature: domain Description: Terminase_3 Location: 1454-1760 bp Feature: gene Location: 1909-2454 bp Feature: domain Description: rve Location: 1945-2239 bp Feature: domain Description: rve Location: 1945-2 2 39 bp Feature: gene Location: 2526-3770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2730-3396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 730-3396 bp Feature: domain Description: GIIM Note: maturase Location: 3477-3675 bp Feature: domain Description: GIIM Note: maturase Location: 3477-3675 bp Feature: gene Location: 3898-4104 bp Feature: gene Location: 4141-4413 bp Feature: gene Location: 57320-57622 bp Feature: domain Description: rpmE2 Location: 57368-57611 bp Feature: domain Description: rpmE2 Location: 57368-57611 bp Feature: gene Location: 57669-57902 bp Feature: gene Location: 58118-58531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58172-58424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58172 -5842 4 bp Feature: gene Location: 58556-59002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58664-58961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58664-58961 bp Feature: gene Location: 59322-59684 bp Feature: gene Location: 61266-61424 bp Feature: domain Description: AAA_15 Location: 61281-61416 bp Feature: domain Description: AAA_15 Location: 612 81-61416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Terminase_3 (pfam04466), rve (pfam00665), RVT-GII, GIIM (pfam08388), rpmE2 (PRK01678), AAA_15 (pfam13175)