myRT

myRT report for GCA_011754425.1_ASM1175442v1

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Seq: JAAQVW010000001.1 Enterococcus faecalis strain S.fA104, whole genome shotgun sequence (3014099 bp)
Overview 1 RT 1: 1369628-1373879 bp 2 RT 2: 2491647-2500955 bp 3 RT 3: 2507692-2514846 bp Neighborhood of RT #1 [1369628, 1373983] RelB_DinJ FtsK_SpoIIIE RVT-GII group_II_RT_mat HNHc FtsK Neighborhood of RT #2 [2491647, 2500955] TnpV SF2_C_SNF RVT-GII Intron_maturas2 HNHc N6_Mtase COG4646 Neighborhood of RT #3 [2507692, 2515157] Peptidase_M23 Phage_lysozyme2 PRK08581 TraC-F-type RVT_N RVT-GII GIIM TraC-F-type Feature: gene Location: 1369628-1369972 bp Feature: domain Description: RelB_DinJ Location: 1369838-1369961 bp Feature: domain Description: RelB_DinJ Location: 1 369838-1 369961 bp Feature: gene Location: 1370042-1371058 bp Feature: domain Description: FtsK_SpoIIIE Location: 1370693-1370936 bp Feature: domain Description: FtsK_SpoIIIE Location: 1 370693-1 370936 bp Feature: gene Location: 1371652-1372866 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372018-1372717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 37201 8-1 37271 7 bp Feature: gene Location: 1372719-1373525 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1372731-1372935 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1 372731 -1 372935 bp Feature: domain Description: HNHc Note: nucleases Location: 1373247-1373412 bp Feature: domain Description: HNHc Note: nucleases Location: 1 373247-1 37341 2 bp Feature: gene Location: 1373627-1373983 bp Feature: domain Description: FtsK Location: 1373642-1373879 bp Feature: domain Description: FtsK Location: 1 373642-1 373879 bp Feature: gene Location: 2491647-2492021 bp Feature: domain Description: TnpV Location: 2491683-2492013 bp Feature: domain Description: TnpV Location: 2491 683-249201 3 bp Feature: gene Location: 2492002-2492469 bp Feature: domain Description: SF2_C_SNF Location: 2492248-2492392 bp Feature: domain Description: SF2_C_SNF Location: 2492248-2492392 bp Feature: gene Location: 2492607-2494394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2492868-2493660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2492868-2493660 bp Feature: domain Description: Intron_maturas2 Location: 2493765-2493999 bp Feature: domain Description: Intron_maturas2 Location: 2493765-2493999 bp Feature: domain Description: HNHc Note: nucleases Location: 2494170-2494356 bp Feature: domain Description: HNHc Note: nucleases Location: 24941 70-2494356 bp Feature: gene Location: 2494892-2500354 bp Feature: domain Description: N6_Mtase Location: 2496905-2497496 bp Feature: domain Description: N6_Mtase Location: 2496905-2497496 bp Feature: domain Description: COG4646 Location: 2498087-2500211 bp Feature: domain Description: COG4646 Location: 2498087-250021 1 bp Feature: gene Location: 2500404-2500955 bp Feature: gene Location: 2507692-2510493 bp Feature: domain Description: Peptidase_M23 Location: 2509135-2509348 bp Feature: domain Description: Peptidase_M23 Location: 25091 35-2509348 bp Feature: domain Description: Phage_lysozyme2 Location: 2509489-2510002 bp Feature: domain Description: Phage_lysozyme2 Location: 2509489-251 0002 bp Feature: domain Description: PRK08581 Location: 2510119-2510455 bp Feature: domain Description: PRK08581 Location: 251 01 1 9-251 0455 bp Feature: gene Location: 2510495-2511529 bp Feature: domain Description: TraC-F-type Location: 2510660-2511356 bp Feature: domain Description: TraC-F-type Location: 251 0660-251 1 356 bp Feature: gene Location: 2511462-2513159 bp Feature: RT Description: RVT_N Location: 2511558-2511798 bp Feature: RT Description: RVT_N Location: 251 1 558-251 1 798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2511846-2512506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 1 846-251 2506 bp Feature: domain Description: GIIM Note: maturase Location: 2512575-2512794 bp Feature: domain Description: GIIM Note: maturase Location: 251 2575-251 2794 bp Feature: gene Location: 2513396-2513524 bp Feature: gene Location: 2513664-2515157 bp Feature: domain Description: TraC-F-type Location: 2514033-2514846 bp Feature: domain Description: TraC-F-type Location: 251 4033-251 4846 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), FtsK (COG1674), TnpV (pfam14198), SF2_C_SNF (cd18793), Intron_maturas2 (pfam01348), N6_Mtase (pfam02384)
COG4646 (Adenine-specific DNA methylase, N12 class ), Peptidase_M23 (pfam01551), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), TraC-F-type (TIGR02746), RVT_N (pfam13655), GIIM (pfam08388)

Seq: JAAQVW010000003.1 Enterococcus faecalis strain S.fA104, whole genome shotgun sequence (52071 bp)
Overview 1 RT 1: 20072-27681 bp Neighborhood of RT #1 [20072, 27707] PrgI RVT_N RVT-GII GIIM TraC-F-type Phage_lysozyme2 PRK08581 Feature: gene Location: 20072-20425 bp Feature: domain Description: PrgI Location: 20096-20345 bp Feature: domain Description: PrgI Location: 2 0096-2 0345 bp Feature: gene Location: 20379-21899 bp Feature: gene Location: 22404-24101 bp Feature: RT Description: RVT_N Location: 22500-22740 bp Feature: RT Description: RVT_N Location: 2 2 500-2 2 740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22788-23448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 788-2 3448 bp Feature: domain Description: GIIM Note: maturase Location: 23517-23736 bp Feature: domain Description: GIIM Note: maturase Location: 2 3517-2 3736 bp Feature: gene Location: 24034-25080 bp Feature: domain Description: TraC-F-type Location: 24208-24904 bp Feature: domain Description: TraC-F-type Location: 2 42 08-2 4904 bp Feature: gene Location: 25092-27707 bp Feature: domain Description: Phage_lysozyme2 Location: 26724-27249 bp Feature: domain Description: Phage_lysozyme2 Location: 2 672 4-2 72 49 bp Feature: domain Description: PRK08581 Location: 27369-27681 bp Feature: domain Description: PRK08581 Location: 2 7369-2 7681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PrgI (pfam12666), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraC-F-type (TIGR02746), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein)