myRT

myRT report for GCA_011771845.1_ASM1177184v1

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Seq: WWAS01001360.1 Anaerolineae bacterium isolate KS2-C051 C_merged_R1_(paired)_contig_30090, whole genome shotgun sequence (2231 bp)
Overview 1 RT 1: 190-2132 bp Neighborhood of RT #1 [190, 2230] RVT-GII Feature: gene Location: 190-471 bp Feature: gene Location: 1024-1821 bp Feature: gene Location: 1787-2230 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1790-2132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 790-21 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WWAS01000082.1 Anaerolineae bacterium isolate KS2-C051 C_merged_R1_(paired)_contig_32140, whole genome shotgun sequence (5618 bp)
Overview 1 RT 1: 338-5614 bp Neighborhood of RT #1 [338, 5616] Succinoglycan_BP_ExoA PRK01103 RVT-CRISPR-like GIIM RVT-CRISPR-like GIIM PLN02791 Feature: gene Location: 338-1324 bp Feature: domain Description: Succinoglycan_BP_ExoA Location: 347-1022 bp Feature: domain Description: Succinoglycan_BP_ExoA Location: 347-102 2 bp Feature: gene Location: 1317-2141 bp Feature: domain Description: PRK01103 Location: 1320-2127 bp Feature: domain Description: PRK01103 Location: 132 0-2 12 7 bp Feature: gene Location: 2362-4884 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2596-3184 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 596-3184 bp Feature: domain Description: GIIM Note: maturase Location: 3322-3520 bp Feature: domain Description: GIIM Note: maturase Location: 332 2 -352 0 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3859-4462 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 3859-4462 bp Feature: domain Description: GIIM Note: maturase Location: 4663-4780 bp Feature: domain Description: GIIM Note: maturase Location: 4663-4780 bp Feature: gene Location: 5353-5616 bp Feature: domain Description: PLN02791 Location: 5368-5614 bp Feature: domain Description: PLN02 791 Location: 5368-5614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Succinoglycan_BP_ExoA (cd02525), PRK01103 (bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase), RVT-CRISPR, GIIM (pfam08388), PLN02791 (Nudix hydrolase homolog)

Seq: WWAS01000986.1 Anaerolineae bacterium isolate KS2-C051 C_merged_R1_(paired)_contig_37887, whole genome shotgun sequence (1343 bp)
Overview 1 RT 1: 365-1339 bp Neighborhood of RT #1 [365, 1341] RVT-GII Feature: gene Location: 365-511 bp Feature: gene Location: 1051-1341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1072-1339 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1072-13 3 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: WWAS01000855.1 Anaerolineae bacterium isolate KS2-C051 C_merged_R1_(paired)_contig_62600, whole genome shotgun sequence (1366 bp)
Overview 1 RT 1: 3-1089 bp Neighborhood of RT #1 [3, 1091] group_II_RT_mat RVT-CRISPR-like GIIM Feature: gene Location: 3-1091 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 12-114 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 12-114 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 195-783 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 195-783 bp Feature: domain Description: GIIM Note: maturase Location: 918-1089 bp Feature: domain Description: GIIM Note: maturase Location: 918-1089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-CRISPR, GIIM (pfam08388)

Seq: WWAS01001490.1 Anaerolineae bacterium isolate KS2-C051 C_merged_R1_(paired)_contig_63658, whole genome shotgun sequence (1810 bp)
Overview 1 RT 1: 133-1809 bp Neighborhood of RT #1 [133, 1809] RVT-GII GIIM Feature: gene Location: 133-1476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 514-1117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 14-1117 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1171-1381 bp Feature: gene Location: 157-1809 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: WWAS01001144.1 Anaerolineae bacterium isolate KS2-C051 C_merged_R1_(paired)_contig_90091, whole genome shotgun sequence (1401 bp)
Overview 1 RT 1: 629-1376 bp Neighborhood of RT #1 [629, 1399] RVT-GII group_II_RT_mat Feature: gene Location: 629-793 bp Feature: gene Location: 344-1399 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551-950 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1010-1376 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1010-1376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)