myRT

myRT report for GCA_011771905.1_ASM1177190v1

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Seq: WWAO01000754.1 Candidatus Aminicenantes bacterium isolate KS1-C158 C_merged_R1_(paired)_contig_120075, whole genome shotgun sequence (24285 bp)
Overview 1 RT 1: 10834-14775 bp Neighborhood of RT #1 [10834, 14775] Peptidase_S9 Peptidase_S9 RVT-GII Feature: gene Location: 10834-11064 bp Feature: gene Location: 11413-12756 bp Feature: domain Description: Peptidase_S9 Location: 12013-12169 bp Feature: domain Description: Peptidase_S9 Location: 1 201 3-1 21 69 bp Feature: domain Description: Peptidase_S9 Location: 12379-12628 bp Feature: domain Description: Peptidase_S9 Location: 1 2379-1 2628 bp Feature: gene Location: 13130-14152 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13448-13760 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3448-1 3760 bp Feature: gene Location: 14128-14316 bp Feature: gene Location: 14527-14775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S9 (pfam00326), RVT-GII

Seq: WWAO01000247.1 Candidatus Aminicenantes bacterium isolate KS1-C158 C_merged_R1_(paired)_contig_150634, whole genome shotgun sequence (5060 bp)
Overview 1 RT 1: 1973-5013 bp Neighborhood of RT #1 [1973, 5057] HRDC Avd_like RVT-DGRs YfmG MPP_1 MPP_1 Feature: gene Location: 1973-2473 bp Feature: domain Description: HRDC Location: 2228-2420 bp Feature: domain Description: HRDC Location: 2 2 2 8-2 42 0 bp Feature: gene Location: 2466-2816 bp Feature: domain Description: Avd_like Location: 2487-2796 bp Feature: domain Description: Avd_like Location: 2 487-2 796 bp Feature: gene Location: 2813-3829 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3020-3620 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 302 0-362 0 bp Feature: gene Location: 3801-4076 bp Feature: domain Description: YfmG Location: 3834-3960 bp Feature: domain Description: YfmG Location: 3834-3960 bp Feature: gene Location: 4242-5057 bp Feature: domain Description: MPP_1 Location: 4260-4527 bp Feature: domain Description: MPP_1 Location: 42 60-452 7 bp Feature: domain Description: MPP_1 Location: 4710-5013 bp Feature: domain Description: MPP_1 Location: 4710-5013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HRDC (smart00341), Avd_like (cd16376), RVT-DGRs, YfmG (COG1262), MPP_1 (cd07400)

Seq: WWAO01000465.1 Candidatus Aminicenantes bacterium isolate KS1-C158 C_merged_R1_(paired)_contig_157146, whole genome shotgun sequence (2648 bp)
Overview 1 RT 1: 2-2430 bp Neighborhood of RT #1 [2, 2522] pfam03781 HRDC RVT-DGRs Feature: gene Location: 2-922 bp Feature: domain Description: pfam03781 Location: 152-905 bp Feature: domain Description: pfam03 781 Location: 152-905 bp Feature: gene Location: 1143-1745 bp Feature: domain Description: HRDC Location: 1539-1731 bp Feature: domain Description: HRDC Location: 153 9-173 1 bp Feature: gene Location: 2079-2522 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2274-2430 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2274-243 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HRDC (smart00341), RVT-DGRs, pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1)

Seq: WWAO01000278.1 Candidatus Aminicenantes bacterium isolate KS1-C158 C_merged_R1_(paired)_contig_33285, whole genome shotgun sequence (18714 bp)
Overview 1 RT 1: 10373-15362 bp Neighborhood of RT #1 [10373, 15370] PIN_VapC-like COG5635 pfam03781 RVT-DGRs YfmG Avd_like Feature: gene Location: 10373-10789 bp Feature: domain Description: PIN_VapC-like Location: 10391-10781 bp Feature: domain Description: PIN_VapC-like Location: 10391-10781 bp Feature: gene Location: 11196-13817 bp Feature: domain Description: COG5635 Location: 11451-12603 bp Feature: domain Description: COG5635 Location: 114 51-12603 bp Feature: domain Description: pfam03781 Location: 13008-13797 bp Feature: domain Description: pfam03781 Location: 13008-13797 bp Feature: gene Location: 14169-14552 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14379-14496 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14 379-14 4 96 bp Feature: gene Location: 14680-14925 bp Feature: domain Description: YfmG Location: 14710-14821 bp Feature: domain Description: YfmG Location: 14 710-14 821 bp Feature: gene Location: 14933-15370 bp Feature: domain Description: Avd_like Location: 15056-15362 bp Feature: domain Description: Avd_like Location: 15056-15362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_VapC-like (cd18715), COG5635 (Predicted NTPase, NACHT family domain ), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-DGRs, YfmG (COG1262), Avd_like (cd16376)

Seq: WWAO01000580.1 Candidatus Aminicenantes bacterium isolate KS1-C158 C_merged_R1_(paired)_contig_62808, whole genome shotgun sequence (42513 bp)
Overview 1 RT 1: 11131-14024 bp Neighborhood of RT #1 [11131, 14024] RVT-GII KOG4768 Feature: gene Location: 11131-11643 bp Feature: gene Location: 11732-12037 bp Feature: gene Location: 12090-13115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12093-12723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12093-12723 bp Feature: domain Description: KOG4768 Location: 12810-12936 bp Feature: domain Description: KOG4768 Location: 12810-12936 bp Feature: gene Location: 13241-13558 bp Feature: gene Location: 13842-14024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )