myRT

myRT report for GCA_011774565.1_ASM1177456v1

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Seq: JAACAV010000773.1 Gammaproteobacteria bacterium isolate KS3-K060 K_merged_R1_(paired)_contig_125038, whole genome shotgun sequence (1172 bp)
Overview 1 RT 1: 1-1072 bp Neighborhood of RT #1 [1, 1072] RVT-GII GIIM Feature: gene Location: 1-894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-601 bp Feature: domain Description: GIIM Note: maturase Location: 643-760 bp Feature: domain Description: GIIM Note: maturase Location: 643-760 bp Feature: gene Location: 932-1072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAACAV010000867.1 Gammaproteobacteria bacterium isolate KS3-K060 K_merged_R1_(paired)_contig_18543, whole genome shotgun sequence (3119 bp)
Overview 1 RT 1: 946-3105 bp Neighborhood of RT #1 [946, 3116] RVT-GII GIIM TPR Feature: gene Location: 946-1089 bp Feature: gene Location: 1277-2599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1529-2147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 152 9-2 147 bp Feature: domain Description: GIIM Note: maturase Location: 2195-2420 bp Feature: domain Description: GIIM Note: maturase Location: 2 195-2 42 0 bp Feature: gene Location: 2982-3116 bp Feature: domain Description: TPR Location: 2985-3105 bp Feature: domain Description: TPR Location: 2 985-3105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TPR (smart00028)

Seq: JAACAV010001028.1 Gammaproteobacteria bacterium isolate KS3-K060 K_merged_R1_(paired)_contig_67743, whole genome shotgun sequence (1043 bp)
Overview 1 RT 1: 1-786 bp Neighborhood of RT #1 [1, 953] RVT-GII group_II_RT_mat Feature: gene Location: 1-561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-424 bp Feature: gene Location: 408-953 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 435-786 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 43 5-786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)