myRT

myRT report for GCA_011777045.1_ASM1177704v1

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Seq: JAABWB010002287.1 Aliifodinibius sp. isolate ACK-K096 K_merged_R1_(paired)_contig_151327, whole genome shotgun sequence (4216 bp)
Overview 1 RT 1: 1-2343 bp Neighborhood of RT #1 [1, 2381] RVT-GII Kelch Kelch Kelch_1 Por_Secre_tail FlgD_ig Feature: gene Location: 1-255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-1 39 bp Feature: gene Location: 295-1413 bp Feature: domain Description: Kelch Location: 334-613 bp Feature: domain Description: Kelch Location: 334-61 3 bp Feature: domain Description: Kelch Location: 637-913 bp Feature: domain Description: Kelch Location: 637-91 3 bp Feature: domain Description: Kelch_1 Location: 1000-1102 bp Feature: domain Description: Kelch_1 Location: 1 000-1 1 02 bp Feature: domain Description: Por_Secre_tail Location: 1177-1402 bp Feature: domain Description: Por_Secre_tail Location: 1 1 77-1 402 bp Feature: gene Location: 1797-2381 bp Feature: domain Description: FlgD_ig Location: 2181-2343 bp Feature: domain Description: FlgD_ig Location: 21 81 -2343 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Kelch (smart00612), Kelch_1 (pfam01344), Por_Secre_tail (TIGR04183), FlgD_ig (pfam13860)

Seq: JAABWB010002389.1 Aliifodinibius sp. isolate ACK-K096 K_merged_R1_(paired)_contig_179900, whole genome shotgun sequence (1659 bp)
Overview 1 RT 1: 1-889 bp Neighborhood of RT #1 [1, 1518] TAtT RVT-UG14 Feature: gene Location: 1-159 bp Feature: domain Description: TAtT Location: 22-160 bp Feature: domain Description: TAtT Location: 2 2 -160 bp Feature: gene Location: 613-1518 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 775-889 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 775-889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TAtT (pfam16811), RVT-UG14