myRT

myRT report for GCA_011777205.1_ASM1177720v1

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Seq: JAABVV010000247.1 Phycisphaerae bacterium isolate ACK-K067 K_merged_R1_(paired)_contig_129985, whole genome shotgun sequence (2892 bp)
Overview 1 RT 1: 46-2889 bp Neighborhood of RT #1 [46, 2889] group_II_RT_mat RVT-GII Feature: gene Location: 46-201 bp Feature: gene Location: 664-1086 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 883-1084 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 883-1 084 bp Feature: gene Location: 1142-2095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1148-1748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 48-1 748 bp Feature: gene Location: 2121-2360 bp Feature: gene Location: 2563-2889 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416)

Seq: JAABVV010000332.1 Phycisphaerae bacterium isolate ACK-K067 K_merged_R1_(paired)_contig_147476, whole genome shotgun sequence (6262 bp)
Overview 1 RT 1: 1-6145 bp Neighborhood of RT #1 [1, 6145] CarboxypepD_reg ligand_gated_channel STKc_PknB_like TolBN TPR TPR RVT_N RVT-GII GIIM Feature: gene Location: 1-1926 bp Feature: domain Description: CarboxypepD_reg Location: 85-325 bp Feature: domain Description: CarboxypepD_reg Location: 85-32 5 bp Feature: domain Description: ligand_gated_channel Location: 487-1735 bp Feature: domain Description: ligand_gated_channel Location: 487-1735 bp Feature: gene Location: 1988-3844 bp Feature: domain Description: STKc_PknB_like Location: 1991-2264 bp Feature: domain Description: STKc_PknB_like Location: 1991-2 2 64 bp Feature: domain Description: TolBN Location: 2426-2810 bp Feature: domain Description: TolBN Location: 2 42 6-2 810 bp Feature: domain Description: TPR Location: 2867-3293 bp Feature: domain Description: TPR Location: 2 867-32 93 bp Feature: domain Description: TPR Location: 3350-3605 bp Feature: domain Description: TPR Location: 3350-3605 bp Feature: gene Location: 4476-5999 bp Feature: RT Description: RVT_N Location: 4641-4707 bp Feature: RT Description: RVT_N Location: 4641-4707 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4857-5478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4857-5478 bp Feature: domain Description: GIIM Note: maturase Location: 5541-5766 bp Feature: domain Description: GIIM Note: maturase Location: 5541-5766 bp Feature: gene Location: 5930-6145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CarboxypepD_reg (pfam13620), ligand_gated_channel (cd01347), STKc_PknB_like (cd14014), TolBN (COG5616), TPR (smart00028), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JAABVV010001218.1 Phycisphaerae bacterium isolate ACK-K067 K_merged_R1_(paired)_contig_156724, whole genome shotgun sequence (2569 bp)
Overview 1 RT 1: 246-2353 bp Neighborhood of RT #1 [246, 2353] RVT-GII GIIM Feature: gene Location: 246-452 bp Feature: gene Location: 460-672 bp Feature: gene Location: 678-1913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882-1539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 882-153 9 bp Feature: domain Description: GIIM Note: maturase Location: 1620-1845 bp Feature: domain Description: GIIM Note: maturase Location: 1620-1845 bp Feature: gene Location: 2042-2353 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JAABVV010000572.1 Phycisphaerae bacterium isolate ACK-K067 K_merged_R1_(paired)_contig_90615, whole genome shotgun sequence (74086 bp)
Overview 1 RT 1: 71653-74084 bp Neighborhood of RT #1 [71653, 74083] RVT-GII Feature: gene Location: 71653-72720 bp Feature: gene Location: 73092-73472 bp Feature: gene Location: 73472-74083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73754-74084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73754 -74 084 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII