myRT

myRT report for GCA_011806485.1_ASM1180648v1

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Seq: JAATOR010000102.1 Vibrio diazotrophicus strain HF9B NODE_102_length_12746_cov_3.520799, whole genome shotgun sequence (12746 bp)
Overview 1 RT 1: 4592-8072 bp Neighborhood of RT #1 [4592, 8080] PHA01082 SLATT_5 RVT-UG17 PHA01082 DUF3634 Feature: gene Location: 4592-4972 bp Feature: domain Description: PHA01082 Location: 4601-4952 bp Feature: domain Description: PHA01 082 Location: 4601 -4952 bp Feature: gene Location: 5323-5874 bp Feature: domain Description: SLATT_5 Location: 5332-5854 bp Feature: domain Description: SLATT_5 Location: 5332-5854 bp Feature: gene Location: 5884-7218 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6106-6688 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 61 06-6688 bp Feature: gene Location: 7233-7604 bp Feature: domain Description: PHA01082 Location: 7236-7578 bp Feature: domain Description: PHA01 082 Location: 7236-7578 bp Feature: gene Location: 7763-8080 bp Feature: domain Description: DUF3634 Location: 7769-8072 bp Feature: domain Description: DUF3634 Location: 7769-8072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA01082 (putative transcription regulator), SLATT_5 (pfam18160), RVT-UG17, DUF3634 (pfam12321)

Seq: JAATOR010000027.1 Vibrio diazotrophicus strain HF9B NODE_27_length_50170_cov_3.888388, whole genome shotgun sequence (50170 bp)
Overview 1 RT 1: 27858-33316 bp Neighborhood of RT #1 [27858, 33316] HEPN_RES_NTD1 RES RVT-UG15 Feature: gene Location: 27858-28421 bp Feature: gene Location: 28427-29836 bp Feature: domain Description: HEPN_RES_NTD1 Location: 28499-28919 bp Feature: domain Description: HEPN_RES_NTD1 Location: 2 8499-2 8919 bp Feature: domain Description: RES Location: 29105-29513 bp Feature: domain Description: RES Location: 2 9105-2 9513 bp Feature: gene Location: 30201-31799 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 30612-31014 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 30612 -31014 bp Feature: gene Location: 32080-32358 bp Feature: gene Location: 32405-33316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN_RES_NTD1 (pfam18870), RES (smart00953), RVT-UG15

Seq: JAATOR010000004.1 Vibrio diazotrophicus strain HF9B NODE_4_length_101327_cov_3.751240, whole genome shotgun sequence (101327 bp)
Overview 1 RT 1: 90380-96618 bp Neighborhood of RT #1 [90380, 96680] AlbA_2 RVT-Retrons ABC_DR_subfamily_A ABC_DR_subfamily_A Arm-DNA-bind_3 INT_P4_C Feature: gene Location: 90380-90874 bp Feature: gene Location: 90919-92013 bp Feature: domain Description: AlbA_2 Location: 90973-91348 bp Feature: domain Description: AlbA_2 Location: 90973 -913 48 bp Feature: gene Location: 92959-93960 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93085-93649 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93 085-93 649 bp Feature: gene Location: 93962-95353 bp Feature: domain Description: ABC_DR_subfamily_A Location: 94013-94118 bp Feature: domain Description: ABC_DR_subfamily_A Location: 94013 -94118 bp Feature: domain Description: ABC_DR_subfamily_A Location: 94376-94733 bp Feature: domain Description: ABC_DR_subfamily_A Location: 943 76-9473 3 bp Feature: gene Location: 95427-96680 bp Feature: domain Description: Arm-DNA-bind_3 Location: 95445-95688 bp Feature: domain Description: Arm-DNA-bind_3 Location: 95445-95688 bp Feature: domain Description: INT_P4_C Location: 96063-96618 bp Feature: domain Description: INT_P4_C Location: 96063 -96618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlbA_2 (pfam04326), RVT-Retrons, ABC_DR_subfamily_A (cd03230), Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801)