myRT

myRT report for GCA_011806535.1_ASM1180653v1

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Seq: JAATOQ010000165.1 Vibrio campbellii strain HF17 NODE_165_length_11904_cov_3.231081, whole genome shotgun sequence (11904 bp)
Overview 1 RT 1: 6678-11675 bp Neighborhood of RT #1 [6678, 11675] RVT-Retrons Feature: gene Location: 6678-7085 bp Feature: gene Location: 7102-8403 bp Feature: gene Location: 8493-9716 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8808-9453 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8808-9453 bp Feature: gene Location: 10078-11196 bp Feature: gene Location: 11196-11675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: JAATOQ010000229.1 Vibrio campbellii strain HF17 NODE_229_length_7523_cov_4.056809, whole genome shotgun sequence (7523 bp)
Overview 1 RT 1: 5682-7437 bp Neighborhood of RT #1 [5682, 7451] HTH_21 RVT-GII Feature: gene Location: 5682-6005 bp Feature: domain Description: HTH_21 Location: 5772-5922 bp Feature: domain Description: HTH_2 1 Location: 5772 -592 2 bp Feature: gene Location: 6341-6508 bp Feature: gene Location: 6690-7451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6963-7437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6963-7437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_21 (pfam13276), RVT-GII

Seq: JAATOQ010000075.1 Vibrio campbellii strain HF17 NODE_75_length_22618_cov_3.276962, whole genome shotgun sequence (22618 bp)
Overview 1 RT 1: 6950-11518 bp Neighborhood of RT #1 [6950, 11518] PRK02101 GIIM RVT_N RVT-GII Feature: gene Location: 6950-7756 bp Feature: domain Description: PRK02101 Location: 6983-7748 bp Feature: domain Description: PRK02101 Location: 6983 -7748 bp Feature: gene Location: 8174-8614 bp Feature: domain Description: GIIM Note: maturase Location: 8180-8390 bp Feature: domain Description: GIIM Note: maturase Location: 8180-83 90 bp Feature: gene Location: 8575-9645 bp Feature: RT Description: RVT_N Location: 8623-8863 bp Feature: RT Description: RVT_N Location: 8623 -8863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8911-9529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8911-9529 bp Feature: gene Location: 9719-10039 bp Feature: gene Location: 10319-11518 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK02101 (peroxide stress protein YaaA), GIIM (pfam08388), RVT_N (pfam13655), RVT-GII