myRT

myRT report for GCA_011881755.1_ASM1188175v1

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Seq: JAATUA010000002.1 Listeria monocytogenes strain SCPM-O-B-8701 2length=279923, whole genome shotgun sequence (279923 bp)
Overview 1 RT 1: 265171-273473 bp Neighborhood of RT #1 [265171, 273493] TpcC LysR RVT-GII PRK06482 COG4932 CollagenBindB Feature: gene Location: 265171-266088 bp Feature: domain Description: TpcC Location: 265408-266074 bp Feature: domain Description: TpcC Location: 265408-266074 bp Feature: gene Location: 266322-267227 bp Feature: domain Description: LysR Location: 266325-267204 bp Feature: domain Description: LysR Location: 266325-267204 bp Feature: gene Location: 267681-268400 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268002-268398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 268002-268398 bp Feature: gene Location: 268295-268639 bp Feature: domain Description: PRK06482 Location: 268376-268628 bp Feature: domain Description: PRK06482 Location: 268376-268628 bp Feature: gene Location: 269312-273493 bp Feature: domain Description: COG4932 Location: 269351-273137 bp Feature: domain Description: COG4932 Location: 269351 -2731 37 bp Feature: domain Description: CollagenBindB Location: 273191-273473 bp Feature: domain Description: CollagenBindB Location: 2731 91 -273473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TpcC (pfam12642), LysR (COG0583), RVT-GII, PRK06482 (SDR family oxidoreductase), COG4932 (Uncharacterized surface anchored protein ), CollagenBindB (cl15753)