myRT

myRT report for GCA_011881795.1_ASM1188179v1

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Seq: JAATTZ010000013.1 Listeria monocytogenes strain SCPM-O-B-8702 13length=33168, whole genome shotgun sequence (33168 bp)
Overview 1 RT 1: 6431-14733 bp Neighborhood of RT #1 [6431, 14747] COG4932 CollagenBindB PRK06482 RVT-GII LysR TpcC Feature: gene Location: 6431-10612 bp Feature: domain Description: COG4932 Location: 6470-10256 bp Feature: domain Description: COG4932 Location: 6470-1 0256 bp Feature: domain Description: CollagenBindB Location: 10310-10592 bp Feature: domain Description: CollagenBindB Location: 1 031 0-1 0592 bp Feature: gene Location: 11285-11629 bp Feature: domain Description: PRK06482 Location: 11366-11618 bp Feature: domain Description: PRK06482 Location: 1 1 366-1 1 61 8 bp Feature: gene Location: 11524-12243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11845-12241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 845-1 2241 bp Feature: gene Location: 12697-13602 bp Feature: domain Description: LysR Location: 12700-13579 bp Feature: domain Description: LysR Location: 1 2700-1 3579 bp Feature: gene Location: 13836-14747 bp Feature: domain Description: TpcC Location: 14067-14733 bp Feature: domain Description: TpcC Location: 1 4067-1 4733 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06482 (SDR family oxidoreductase), RVT-GII, LysR (COG0583), TpcC (pfam12642), COG4932 (Uncharacterized surface anchored protein ), CollagenBindB (cl15753)