myRT

myRT report for GCA_011927905.1_ASM1192790v1

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Seq: JAATJL010000001.1 Arthrobacter pigmenti strain DSM 16403 Ga0104573_01, whole genome shotgun sequence (3793795 bp)
Overview 1 RT 1: 565817-572737 bp 2 RT 2: 1609499-1616205 bp 3 RT 3: 3206260-3211891 bp Neighborhood of RT #1 [565817, 572769] katE katE RVT-GII GIIM MmsB Neighborhood of RT #2 [1609499, 1616273] QcrB MngR RVT-GII GIIM Cyt_c_ox_IV CyoB Neighborhood of RT #3 [3206260, 3211923] MviM rhaM RVT-Retrons PurR RhaI_grampos Feature: gene Location: 565817-566473 bp Feature: domain Description: katE Location: 566015-566468 bp Feature: domain Description: katE Location: 56601 5-566468 bp Feature: gene Location: 566549-568042 bp Feature: domain Description: katE Location: 566552-568025 bp Feature: domain Description: katE Location: 566552-568025 bp Feature: gene Location: 568629-569981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 568917-569532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56891 7-569532 bp Feature: domain Description: GIIM Note: maturase Location: 569586-569805 bp Feature: domain Description: GIIM Note: maturase Location: 569586-569805 bp Feature: gene Location: 570184-571704 bp Feature: gene Location: 571873-572769 bp Feature: domain Description: MmsB Location: 571951-572737 bp Feature: domain Description: MmsB Location: 571 951 -572737 bp Feature: gene Location: 1609499-1611184 bp Feature: domain Description: QcrB Location: 1609553-1610834 bp Feature: domain Description: QcrB Location: 1 609553-1 61 0834 bp Feature: gene Location: 1611298-1612080 bp Feature: domain Description: MngR Location: 1611346-1612015 bp Feature: domain Description: MngR Location: 1 61 1 346-1 61 201 5 bp Feature: gene Location: 1612703-1614055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1612991-1613606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 61 2991 -1 61 3606 bp Feature: domain Description: GIIM Note: maturase Location: 1613660-1613879 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 3660-1 61 3879 bp Feature: gene Location: 1614144-1614545 bp Feature: domain Description: Cyt_c_ox_IV Location: 1614147-1614540 bp Feature: domain Description: Cyt_c_ox_IV Location: 1 61 41 47-1 61 4540 bp Feature: gene Location: 1614546-1616273 bp Feature: domain Description: CyoB Location: 1614618-1616205 bp Feature: domain Description: CyoB Location: 1 61 461 8-1 61 6205 bp Feature: gene Location: 3206260-3207348 bp Feature: domain Description: MviM Location: 3206272-3207280 bp Feature: domain Description: MviM Location: 3206272-3207280 bp Feature: gene Location: 3207451-3207783 bp Feature: domain Description: rhaM Location: 3207460-3207763 bp Feature: domain Description: rhaM Location: 3207460-3207763 bp Feature: gene Location: 3207859-3209214 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3208363-3208987 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3208363-3208987 bp Feature: gene Location: 3209455-3210453 bp Feature: domain Description: PurR Location: 3209464-3210448 bp Feature: domain Description: PurR Location: 3209464-321 0448 bp Feature: gene Location: 3210757-3211923 bp Feature: domain Description: RhaI_grampos Location: 3210772-3211891 bp Feature: domain Description: RhaI_grampos Location: 321 0772-321 1 891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT katE (PRK11249), RVT-GII, GIIM (pfam08388), MmsB (COG2084), QcrB (COG1290), MngR (COG2188), Cyt_c_ox_IV (pfam12270), CyoB (TIGR02843), MviM (COG0673), rhaM (pfam05336)
RVT-Retrons, PurR (COG1609), RhaI_grampos (TIGR02635)