myRT

myRT report for GCA_011958345.1_ASM1195834v1

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Seq: BLMT01000051.1 Lachnospiraceae bacterium IMSAG_185 DNA, IMSAG_185_contig_51, whole genome shotgun sequence (26335 bp)
Overview 1 RT 1: 113-3189 bp Neighborhood of RT #1 [113, 3189] Mu-transpos_C RVT-GII Feature: gene Location: 113-592 bp Feature: domain Description: Mu-transpos_C Location: 335-482 bp Feature: domain Description: Mu-transpos_C Location: 335-482 bp Feature: gene Location: 1156-1983 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1600-1963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 600-1 963 bp Feature: gene Location: 1991-2230 bp Feature: gene Location: 2335-3189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mu-transpos_C (pfam09299), RVT-GII

Seq: BLMT01000134.1 Lachnospiraceae bacterium IMSAG_185 DNA, IMSAG_185_contig_134, whole genome shotgun sequence (19062 bp)
Overview 1 RT 1: 8488-13918 bp Neighborhood of RT #1 [8488, 13944] HTH_XRE HTH_XRE RVT-UG5 nitrilase SapB Rhomboid Feature: gene Location: 8488-8832 bp Feature: domain Description: HTH_XRE Location: 8500-8668 bp Feature: domain Description: HTH_XRE Location: 8500-8668 bp Feature: gene Location: 8940-9281 bp Feature: domain Description: HTH_XRE Location: 8952-9123 bp Feature: domain Description: HTH_XRE Location: 8952 -912 3 bp Feature: gene Location: 9532-12606 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 10021-10522 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1002 1-1052 2 bp Feature: domain Description: nitrilase Location: 11899-12490 bp Feature: domain Description: nitrilase Location: 11899-12 490 bp Feature: gene Location: 12676-13362 bp Feature: domain Description: SapB Location: 12700-13351 bp Feature: domain Description: SapB Location: 12 700-13351 bp Feature: gene Location: 13363-13944 bp Feature: domain Description: Rhomboid Location: 13495-13918 bp Feature: domain Description: Rhomboid Location: 13495-13918 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG5, nitrilase (cl11424), SapB (smart00741), Rhomboid (pfam01694)