myRT

myRT report for GCA_011958585.1_ASM1195858v1

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Seq: BLMV01000235.1 Lachnospiraceae bacterium IMSAG_249 DNA, IMSAG_249_contig_235, whole genome shotgun sequence (12355 bp)
Overview 1 RT 1: 140-3308 bp Neighborhood of RT #1 [140, 3478] RVT-GII TraG_VirD4 Feature: gene Location: 140-2029 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458-1202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 458-1 202 bp Feature: gene Location: 2017-2340 bp Feature: gene Location: 2651-3478 bp Feature: domain Description: TraG_VirD4 Location: 3152-3308 bp Feature: domain Description: TraG_VirD4 Location: 31 52-3308 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, TraG_VirD4

Seq: BLMV01000248.1 Lachnospiraceae bacterium IMSAG_249 DNA, IMSAG_249_contig_248, whole genome shotgun sequence (108242 bp)
Overview 1 RT 1: 21613-23585 bp Neighborhood of RT #1 [21613, 23585] RVT_N RVT-GII Feature: gene Location: 21613-21759 bp Feature: gene Location: 22143-22307 bp Feature: gene Location: 22321-22863 bp Feature: RT Description: RVT_N Location: 22336-22579 bp Feature: RT Description: RVT_N Location: 2 2 336-2 2 579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22627-22804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 62 7-2 2 804 bp Feature: gene Location: 22841-22993 bp Feature: gene Location: 23418-23585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: BLMV01000403.1 Lachnospiraceae bacterium IMSAG_249 DNA, IMSAG_249_contig_403, whole genome shotgun sequence (10945 bp)
Overview 1 RT 1: 1-4659 bp Neighborhood of RT #1 [1, 4697] RVT-GII GIIM DUF2971 lnt lnt Feature: gene Location: 1-165 bp Feature: gene Location: 392-628 bp Feature: gene Location: 734-2032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 989-1682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 989-1682 bp Feature: domain Description: GIIM Note: maturase Location: 1742-1961 bp Feature: domain Description: GIIM Note: maturase Location: 1742-1961 bp Feature: gene Location: 2234-3124 bp Feature: domain Description: DUF2971 Location: 2498-2801 bp Feature: domain Description: DUF2971 Location: 2498-2801 bp Feature: gene Location: 3207-4697 bp Feature: domain Description: lnt Location: 3414-4224 bp Feature: domain Description: lnt Location: 3 414-4224 bp Feature: domain Description: lnt Location: 4254-4659 bp Feature: domain Description: lnt Location: 4254-4659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2971 (pfam11185), lnt (TIGR00546), RVT-GII, GIIM (pfam08388)