myRT

myRT report for GCA_011959105.1_ASM1195910v1

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Seq: BLLU01000029.1 Lachnospiraceae bacterium IMSAGC_003 DNA, IMSAGC_003_contig_29, whole genome shotgun sequence (5655 bp)
Overview 1 RT 1: 3-2038 bp Neighborhood of RT #1 [3, 2038] RVT-DGRs Feature: gene Location: 3-218 bp Feature: gene Location: 329-1447 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 536-1136 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 536-1 1 36 bp Feature: gene Location: 1444-1740 bp Feature: gene Location: 1910-2038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: BLLU01000059.1 Lachnospiraceae bacterium IMSAGC_003 DNA, IMSAGC_003_contig_59, whole genome shotgun sequence (12247 bp)
Overview 1 RT 1: 4400-7903 bp Neighborhood of RT #1 [4400, 8019] PHA00653 Avd_like RVT-DGRs Phage_holin_4_1 Feature: gene Location: 4400-5542 bp Feature: domain Description: PHA00653 Location: 4535-5537 bp Feature: domain Description: PHA00653 Location: 4535-5537 bp Feature: gene Location: 5584-5940 bp Feature: domain Description: Avd_like Location: 5614-5917 bp Feature: domain Description: Avd_like Location: 5614-5917 bp Feature: gene Location: 6264-7358 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6501-7122 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6501-712 2 bp Feature: gene Location: 7355-7540 bp Feature: gene Location: 7531-8019 bp Feature: domain Description: Phage_holin_4_1 Location: 7570-7903 bp Feature: domain Description: Phage_holin_4_1 Location: 7570-7903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs, Phage_holin_4_1 (pfam05105)

Seq: BLLU01000188.1 Lachnospiraceae bacterium IMSAGC_003 DNA, IMSAGC_003_contig_188, whole genome shotgun sequence (50447 bp)
Overview 1 RT 1: 32715-35268 bp Neighborhood of RT #1 [32715, 35268] RVT-DGRs Feature: gene Location: 32715-32867 bp Feature: gene Location: 32926-33054 bp Feature: gene Location: 33145-34359 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 33424-34090 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 3 424-3 4090 bp Feature: gene Location: 34375-34587 bp Feature: gene Location: 34780-35268 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: BLLU01000223.1 Lachnospiraceae bacterium IMSAGC_003 DNA, IMSAGC_003_contig_223, whole genome shotgun sequence (1910 bp)
Overview 1 RT 1: 422-1905 bp Neighborhood of RT #1 [422, 1907] Avd_like RVT-DGRs Feature: gene Location: 422-901 bp Feature: domain Description: Avd_like Location: 515-854 bp Feature: domain Description: Avd_like Location: 515-854 bp Feature: gene Location: 909-1049 bp Feature: gene Location: 1215-1907 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1404-1905 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14 04 -1905 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: BLLU01000280.1 Lachnospiraceae bacterium IMSAGC_003 DNA, IMSAGC_003_contig_280, whole genome shotgun sequence (24959 bp)
Overview 1 RT 1: 17709-22083 bp Neighborhood of RT #1 [17709, 22083] RVT-DGRs Phage_XkdX Feature: gene Location: 17709-19730 bp Feature: gene Location: 19838-19969 bp Feature: gene Location: 20123-21541 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 20336-20900 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 20336-20900 bp Feature: gene Location: 21747-21902 bp Feature: domain Description: Phage_XkdX Location: 21768-21897 bp Feature: domain Description: Phage_XkdX Location: 21768-21897 bp Feature: gene Location: 21895-22083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_XkdX (pfam09693)