myRT

myRT report for GCA_011959405.1_ASM1195940v1

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Seq: BLLX01000008.1 Muribaculaceae bacterium IMSAGC_006 DNA, IMSAGC_006_contig_8, whole genome shotgun sequence (43873 bp)
Overview 1 RT 1: 6660-12700 bp Neighborhood of RT #1 [6660, 12700] Relaxase YWFCY RVT-GII Intron_maturas2 HNHc TraG-D_C Feature: gene Location: 6660-7943 bp Feature: domain Description: Relaxase Location: 6837-7167 bp Feature: domain Description: Relaxase Location: 6837-71 67 bp Feature: gene Location: 7980-8711 bp Feature: domain Description: YWFCY Location: 7986-8163 bp Feature: domain Description: YWFCY Location: 7986-81 63 bp Feature: gene Location: 9249-11060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9513-10335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951 3-1 0335 bp Feature: domain Description: Intron_maturas2 Location: 10410-10716 bp Feature: domain Description: Intron_maturas2 Location: 1 041 0-1 071 6 bp Feature: domain Description: HNHc Note: nucleases Location: 10890-11034 bp Feature: domain Description: HNHc Note: nucleases Location: 1 0890-1 1 034 bp Feature: gene Location: 11047-12498 bp Feature: domain Description: TraG-D_C Location: 11851-12184 bp Feature: domain Description: TraG-D_C Location: 1 1 851 -1 21 84 bp Feature: gene Location: 12539-12700 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), Relaxase (pfam03432), YWFCY (pfam14293), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BLLX01000024.1 Muribaculaceae bacterium IMSAGC_006 DNA, IMSAGC_006_contig_24, whole genome shotgun sequence (27762 bp)
Overview 1 RT 1: 22937-27761 bp Neighborhood of RT #1 [22937, 27761] Phage_int_SAM_5 INTN1_C_like RVT-DGRs Feature: gene Location: 22937-24022 bp Feature: domain Description: Phage_int_SAM_5 Location: 23183-23465 bp Feature: domain Description: Phage_int_SAM_5 Location: 2 3183-2 3465 bp Feature: domain Description: INTN1_C_like Location: 23510-23984 bp Feature: domain Description: INTN1_C_like Location: 2 3510-2 3984 bp Feature: gene Location: 23994-24353 bp Feature: gene Location: 24506-25960 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24746-25343 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 4746-2 5343 bp Feature: gene Location: 26140-26298 bp Feature: gene Location: 26352-27761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), RVT-DGRs

Seq: BLLX01000086.1 Muribaculaceae bacterium IMSAGC_006 DNA, IMSAGC_006_contig_86, whole genome shotgun sequence (7358 bp)
Overview 1 RT 1: 12-3929 bp Neighborhood of RT #1 [12, 3973] RVT-DGRs PRK10759 Feature: gene Location: 12-1064 bp Feature: gene Location: 1323-1475 bp Feature: gene Location: 1462-3138 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1738-2419 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 173 8-2419 bp Feature: gene Location: 3138-3632 bp Feature: gene Location: 3659-3973 bp Feature: domain Description: PRK10759 Location: 3674-3929 bp Feature: domain Description: PRK10759 Location: 3 674-3 929 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, PRK10759 (YfiM family lipoprotein)

Seq: BLLX01000152.1 Muribaculaceae bacterium IMSAGC_006 DNA, IMSAGC_006_contig_152, whole genome shotgun sequence (2221 bp)
Overview 1 RT 1: 1-2218 bp Neighborhood of RT #1 [1, 2218] RVT-DGRs Feature: gene Location: 1-1767 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 325-1018 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 325-1018 bp Feature: gene Location: 1772-2218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: BLLX01000154.1 Muribaculaceae bacterium IMSAGC_006 DNA, IMSAGC_006_contig_154, whole genome shotgun sequence (2182 bp)
Overview 1 RT 1: 2-1722 bp Neighborhood of RT #1 [2, 1722] RVT_N RVT-GII GIIM Feature: gene Location: 2-1528 bp Feature: RT Description: RVT_N Location: 74-311 bp Feature: RT Description: RVT_N Location: 74-311 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362-1016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362-1016 bp Feature: domain Description: GIIM Note: maturase Location: 1067-1301 bp Feature: domain Description: GIIM Note: maturase Location: 1067-1301 bp Feature: gene Location: 1591-1722 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)