myRT

myRT report for GCA_011959465.1_ASM1195946v1

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Seq: BLLY01000017.1 Lachnospiraceae bacterium IMSAGC_007 DNA, IMSAGC_007_contig_17, whole genome shotgun sequence (44037 bp)
Overview 1 RT 1: 20991-25411 bp Neighborhood of RT #1 [20991, 25482] RVT-DGRs Dam HTH_26 Feature: gene Location: 20991-21914 bp Feature: gene Location: 21966-22556 bp Feature: gene Location: 22864-24048 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23059-23776 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23059-23776 bp Feature: gene Location: 24354-25109 bp Feature: domain Description: Dam Location: 24360-25107 bp Feature: domain Description: Dam Location: 24360-251 07 bp Feature: gene Location: 25210-25482 bp Feature: domain Description: HTH_26 Location: 25225-25411 bp Feature: domain Description: HTH_26 Location: 25225-2541 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Dam (pfam05869), HTH_26 (pfam13443)

Seq: BLLY01000039.1 Lachnospiraceae bacterium IMSAGC_007 DNA, IMSAGC_007_contig_39, whole genome shotgun sequence (42392 bp)
Overview 1 RT 1: 4999-8843 bp 2 RT 2: 23292-26146 bp Neighborhood of RT #1 [4999, 8851] RVT-DGRs CwlO1 Neighborhood of RT #2 [23292, 26358] RVT-GII AcrR ABC2_membrane Feature: gene Location: 4999-6237 bp Feature: gene Location: 6334-6609 bp Feature: gene Location: 6624-8033 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6957-7614 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6957-7614 bp Feature: gene Location: 8321-8545 bp Feature: gene Location: 8549-8851 bp Feature: domain Description: CwlO1 Location: 8588-8843 bp Feature: domain Description: CwlO1 Location: 8588-8843 bp Feature: gene Location: 23292-23432 bp Feature: gene Location: 23619-23846 bp Feature: gene Location: 23843-24106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23891-24077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3891-2 4077 bp Feature: gene Location: 24137-24739 bp Feature: domain Description: AcrR Location: 24167-24701 bp Feature: domain Description: AcrR Location: 2 4167-2 4701 bp Feature: gene Location: 24766-26358 bp Feature: domain Description: ABC2_membrane Location: 25660-26146 bp Feature: domain Description: ABC2 _membrane Location: 2 5660-2 6146 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, CwlO1 (COG3883), RVT-GII, AcrR (COG1309), ABC2_membrane (pfam01061)

Seq: BLLY01000070.1 Lachnospiraceae bacterium IMSAGC_007 DNA, IMSAGC_007_contig_70, whole genome shotgun sequence (75886 bp)
Overview 1 RT 1: 661-4351 bp Neighborhood of RT #1 [661, 4351] RVT-DGRs Avd_like Feature: gene Location: 661-1035 bp Feature: gene Location: 1050-1361 bp Feature: gene Location: 1367-2443 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1577-2240 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1577-2240 bp Feature: gene Location: 2811-3227 bp Feature: domain Description: Avd_like Location: 2877-3201 bp Feature: domain Description: Avd_like Location: 2877-3 201 bp Feature: gene Location: 3305-4351 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376)

Seq: BLLY01000114.1 Lachnospiraceae bacterium IMSAGC_007 DNA, IMSAGC_007_contig_114, whole genome shotgun sequence (20275 bp)
Overview 1 RT 1: 5443-8912 bp Neighborhood of RT #1 [5443, 8912] DUF3789 RVT-GII HNHc Feature: gene Location: 5443-5586 bp Feature: domain Description: DUF3789 Location: 5461-5548 bp Feature: domain Description: DUF3789 Location: 54 61-554 8 bp Feature: gene Location: 5670-5819 bp Feature: gene Location: 6330-8240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6663-7401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6663-74 01 bp Feature: domain Description: HNHc Note: nucleases Location: 7983-8121 bp Feature: domain Description: HNHc Note: nucleases Location: 7983-8121 bp Feature: gene Location: 8407-8568 bp Feature: gene Location: 8643-8912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3789 (pfam12664), RVT-GII, HNHc (smart00507)

Seq: BLLY01000178.1 Lachnospiraceae bacterium IMSAGC_007 DNA, IMSAGC_007_contig_178, whole genome shotgun sequence (3115 bp)
Overview 1 RT 1: 1378-2336 bp Neighborhood of RT #1 [1378, 3112] PHD_like RVT-UG7 Feature: gene Location: 1378-1812 bp Feature: domain Description: PHD_like Location: 1399-1789 bp Feature: domain Description: PHD_like Location: 1399-1789 bp Feature: gene Location: 1919-2050 bp Feature: gene Location: 2213-3112 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2216-2336 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 2216-2336 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHD_like (pfam12910), RVT-UG7

Seq: BLLY01000382.1 Lachnospiraceae bacterium IMSAGC_007 DNA, IMSAGC_007_contig_382, whole genome shotgun sequence (1016 bp)
Overview 1 RT 1: 3-984 bp Neighborhood of RT #1 [3, 995] RVT-GII Feature: gene Location: 3-317 bp Feature: gene Location: 351-995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 702-984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 702-984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BLLY01000487.1 Lachnospiraceae bacterium IMSAGC_007 DNA, IMSAGC_007_contig_487, whole genome shotgun sequence (41614 bp)
Overview 1 RT 1: 1724-6092 bp Neighborhood of RT #1 [1724, 6193] pfam12571 RVT-DGRs DUF16 Feature: gene Location: 1724-2326 bp Feature: domain Description: pfam12571 Location: 1748-2042 bp Feature: domain Description: pfam1257 1 Location: 17 48-2042 bp Feature: gene Location: 2326-3615 bp Feature: gene Location: 4022-5254 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4319-4937 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4319-4937 bp Feature: gene Location: 5598-5792 bp Feature: gene Location: 5885-6193 bp Feature: domain Description: DUF16 Location: 5900-6092 bp Feature: domain Description: DUF16 Location: 5900-6092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam12571 (DUF3751;Phage tail-collar fibre protein), RVT-DGRs, DUF16 (pfam01519)