myRT

myRT report for GCA_011959645.1_ASM1195964v1

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Seq: BLMA01000111.1 Lachnospiraceae bacterium IMSAGC_009 DNA, IMSAGC_009_contig_111, whole genome shotgun sequence (6405 bp)
Overview 1 RT 1: 2928-5439 bp Neighborhood of RT #1 [2928, 6266] TraG_VirD4 RVT-GII Feature: gene Location: 2928-3755 bp Feature: domain Description: TraG_VirD4 Location: 3429-3585 bp Feature: domain Description: TraG_VirD4 Location: 3429-3585 bp Feature: gene Location: 4066-4389 bp Feature: gene Location: 4377-6266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4695-5439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4695-5439 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG_VirD4, RVT-GII

Seq: BLMA01000117.1 Lachnospiraceae bacterium IMSAGC_009 DNA, IMSAGC_009_contig_117, whole genome shotgun sequence (2412 bp)
Overview 1 RT 1: 1-2410 bp Neighborhood of RT #1 [1, 2410] RVT-GII GIIM Feature: gene Location: 1-129 bp Feature: gene Location: 321-455 bp Feature: gene Location: 504-1895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 819-1446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 819-1446 bp Feature: domain Description: GIIM Note: maturase Location: 1500-1728 bp Feature: domain Description: GIIM Note: maturase Location: 1500-172 8 bp Feature: gene Location: 2110-2241 bp Feature: gene Location: 2243-2410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BLMA01000287.1 Lachnospiraceae bacterium IMSAGC_009 DNA, IMSAGC_009_contig_287, whole genome shotgun sequence (5972 bp)
Overview 1 RT 1: 1276-5969 bp Neighborhood of RT #1 [1276, 5969] lnt lnt DUF2971 RVT-GII GIIM Feature: gene Location: 1276-2766 bp Feature: domain Description: lnt Location: 1483-2293 bp Feature: domain Description: lnt Location: 1483 -2293 bp Feature: domain Description: lnt Location: 2323-2728 bp Feature: domain Description: lnt Location: 23 23 -2728 bp Feature: gene Location: 2849-3739 bp Feature: domain Description: DUF2971 Location: 3113-3416 bp Feature: domain Description: DUF2971 Location: 3 113 -3 416 bp Feature: gene Location: 3941-5239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4196-4889 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4196-4889 bp Feature: domain Description: GIIM Note: maturase Location: 4949-5168 bp Feature: domain Description: GIIM Note: maturase Location: 4949-5168 bp Feature: gene Location: 5345-5581 bp Feature: gene Location: 5808-5969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lnt (TIGR00546), DUF2971 (pfam11185), RVT-GII, GIIM (pfam08388)

Seq: BLMA01000309.1 Lachnospiraceae bacterium IMSAGC_009 DNA, IMSAGC_009_contig_309, whole genome shotgun sequence (8135 bp)
Overview 1 RT 1: 63-6496 bp Neighborhood of RT #1 [63, 6496] IS285 RVT-GII GIIM GIIM RVT-GII RVT-GII RVT_N RVT-GII Feature: gene Location: 63-1277 bp Feature: domain Description: IS285 Location: 102-1263 bp Feature: domain Description: IS285 Location: 102-1263 bp Feature: gene Location: 1332-1625 bp Feature: gene Location: 1694-2935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1898-2555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1898-2555 bp Feature: domain Description: GIIM Note: maturase Location: 2636-2855 bp Feature: domain Description: GIIM Note: maturase Location: 2636-2855 bp Feature: gene Location: 3151-3294 bp Feature: gene Location: 3328-3492 bp Feature: gene Location: 3584-3865 bp Feature: domain Description: GIIM Note: maturase Location: 3587-3815 bp Feature: domain Description: GIIM Note: maturase Location: 3587-3815 bp Feature: gene Location: 3865-4542 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4069-4516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 069-4 516 bp Feature: gene Location: 5057-5344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5066-5315 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5066-5315 bp Feature: gene Location: 5460-5903 bp Feature: RT Description: RVT_N Location: 5475-5718 bp Feature: RT Description: RVT_N Location: 54 75-5718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5766-5898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5766-5898 bp Feature: gene Location: 5917-6081 bp Feature: gene Location: 6299-6496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), IS285 (COG3328), RVT_N (pfam13655)

Seq: BLMA01000341.1 Lachnospiraceae bacterium IMSAGC_009 DNA, IMSAGC_009_contig_341, whole genome shotgun sequence (2421 bp)
Overview 1 RT 1: 2-2418 bp Neighborhood of RT #1 [2, 2418] RVT-GII GIIM Feature: gene Location: 2-298 bp Feature: gene Location: 312-449 bp Feature: gene Location: 804-2108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1005-1623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1005 -1623 bp Feature: domain Description: GIIM Note: maturase Location: 1677-1887 bp Feature: domain Description: GIIM Note: maturase Location: 1677-1887 bp Feature: gene Location: 2164-2418 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: BLMA01000356.1 Lachnospiraceae bacterium IMSAGC_009 DNA, IMSAGC_009_contig_356, whole genome shotgun sequence (2542 bp)
Overview 1 RT 1: 436-2104 bp Neighborhood of RT #1 [436, 2451] RVT-GII Intron_maturas2 Feature: gene Location: 436-618 bp Feature: gene Location: 625-2451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889-1729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889-1729 bp Feature: domain Description: Intron_maturas2 Location: 1864-2104 bp Feature: domain Description: Intron_maturas2 Location: 186 4-2104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)